RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 HOMER1Q86YM7 354 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 ADGRF4Q8IZF3 695 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 PROCA1Q8NCQ7 364 aaPredicted RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 SLC39A7Q92504 469 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 PIGSQ96S52 555 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 MAP3K14Q99558 947 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 SLF1Q9BQI6 1058 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 SLC26A6Q9BXS9 759 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 ASCC2Q9H1I8 757 aaPredicted RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 JMJD4Q9H9V9 463 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 GJB4Q9NTQ9 266 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 PPP1R9AQ9ULJ8 1098 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 PARP14Q460N5 1801 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 TESPA1A2RU30 521 aaPredicted RBP9.36□□□□□ -0.91
MDC1-203ENST00000417033 MANSC4A6NHS7 340 aaPredicted RBP9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L15C9J2P7 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L13C9JLJ4 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L11C9JVI0 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L18D6R9N7 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L22D6RA61 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L17D6RBQ6 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L19D6RCP7 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L20D6RJB6 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 PDHXO00330 501 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 CPLX1O14810 134 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 DHX16O60231 1041 aaKnown RBP9.36□□□□□ -0.91
MDC1-203ENST00000417033 HSPA6P17066 643 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 IFNAR1P17181 557 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 STAT2P52630 851 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 USP17L24Q0WX57 530 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 PKN1Q16512 942 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 CDC37Q16543 378 aaPredicted RBP9.36□□□□□ -0.91
MDC1-203ENST00000417033 QRICH1Q2TAL8 776 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 FASTKD5Q7L8L6 764 aaKnown RBP9.36□□□□□ -0.91
MDC1-203ENST00000417033 REPS2Q8NFH8 660 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 SMARCC2Q8TAQ2 1214 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 GPKOWQ92917 476 aaPredicted RBP eCLIP9.36□□□□□ -0.91
MDC1-203ENST00000417033 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 MTMR8Q96EF0 704 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 P2RX7Q99572 595 aaKnown RBP9.36□□□□□ -0.91
MDC1-203ENST00000417033 SPZ1Q9BXG8 430 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 R3HDMLQ9H3Y0 253 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 RIOX1Q9H6W3 641 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 FEM1BQ9UK73 627 aa9.36□□□□□ -0.91
MDC1-203ENST00000417033 V9GY48 417 aaPredicted RBP9.36□□□□□ -0.91
MDC1-203ENST00000417033 ZNF536O15090 1300 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 WDR33Q9C0J8 1336 aaKnown RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 CNMDO75829 334 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 GJB2P29033 226 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 HOXA7P31268 230 aaPredicted RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 GNAQP50148 359 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 IRX5P78411 483 aaPredicted RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 IRX3P78415 501 aaPredicted RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 WWC2Q6AWC2 1192 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 OTUD7BQ6GQQ9 843 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 ANKRD23Q86SG2 305 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 FAM160B2Q86V87 743 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 RANBP17Q9H2T7 1088 aaKnown RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 RAVER2Q9HCJ3 691 aaKnown RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 TXNRD2Q9NNW7 524 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 BTBD7Q9P203 1132 aa9.35□□□□□ -0.91
MDC1-203ENST00000417033 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
MDC1-203ENST00000417033 ADGRA2Q96PE1 1338 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 A0A0G2JMZ2 1700 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 CCDC196A0A1B0GTZ2 297 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 VWA5AO00534 786 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 PRPF3O43395 683 aaKnown RBP9.34□□□□□ -0.91
MDC1-203ENST00000417033 PLA2G6O60733 806 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 PPP1R37O75864 691 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 HERVK_113P62684 666 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 SSRP1Q08945 709 aaKnown RBP9.34□□□□□ -0.91
MDC1-203ENST00000417033 NOGQ13253 232 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 BECN1Q14457 450 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 COG2Q14746 738 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 CPXCR1Q8N123 301 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 CHURC1Q8WUH1 139 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 COA7Q96BR5 231 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 AGBL1Q96MI9 1066 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 LZTS2Q9BRK4 669 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 PAGR1Q9BTK6 254 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 RNF26Q9BY78 433 aaPredicted RBP9.34□□□□□ -0.91
MDC1-203ENST00000417033 VPS54Q9P1Q0 977 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 THSD7BQ9C0I4 1608 aa9.34□□□□□ -0.91
MDC1-203ENST00000417033 STK36Q9NRP7 1315 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 SMCHD1A6NHR9 2005 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 ZBTB5O15062 677 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 C7P10643 843 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 GUCY1B3Q02153 619 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 TMEM132BQ14DG7 1078 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 PPP2R5BQ15173 497 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 PFKFB3Q16875 520 aaPredicted RBP9.33□□□□□ -0.92
MDC1-203ENST00000417033 USH1GQ495M9 461 aa9.33□□□□□ -0.92
MDC1-203ENST00000417033 CPLX2Q6PUV4 134 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms