RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 SPOPO43791 374 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 GSPT1P15170 499 aaKnown RBP17.3■□□□□ 0.36
PHRF1-203ENST00000416188 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHRF1-203ENST00000416188 TAB2Q9NYJ8 693 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 ZC3H13Q5T200 1668 aaKnown RBP17.3■□□□□ 0.36
PHRF1-203ENST00000416188 TUBBP07437 444 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 SLC16A2P36021 539 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 TM6SF1Q9BZW5 370 aa17.3■□□□□ 0.36
PHRF1-203ENST00000416188 NR1I2O75469 434 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 PTH1RQ03431 593 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 TRIM14Q14142 442 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 CPLX4Q7Z7G2 160 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 ARFGAP2Q8N6H7 521 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 COA7Q96BR5 231 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 PIH1D3Q9NQM4 214 aaKnown RBP17.29■□□□□ 0.36
PHRF1-203ENST00000416188 KCNG1Q9UIX4 513 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 NLRP12P59046 1061 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 BLIDQ8IZY5 108 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 TBC1D7Q9P0N9 293 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 CD163L1Q9NR16 1453 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 KRT9P35527 623 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 POSTNQ15063 836 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 FAM160B1Q5W0V3 765 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 CYP26C1Q6V0L0 522 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 RSPH3Q86UC2 560 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 FMNL3Q8IVF7 1028 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 NAPGQ99747 312 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-203ENST00000416188 KCNK9Q9NPC2 374 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 LAMC1P11047 1609 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 FOSP01100 380 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-203ENST00000416188 ZNF445P59923 1031 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 SEL1L2Q5TEA6 688 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 GTF3C6Q969F1 213 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 TTC14Q96N46 770 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 WDR70Q9NW82 654 aa17.29■□□□□ 0.36
PHRF1-203ENST00000416188 PALM3A6NDB9 673 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-203ENST00000416188 CAMTA2O94983 1202 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 HOXD10P28358 340 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 VWA3BQ502W6 1294 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 NEXMIFQ5QGS0 1516 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 EBAG9O00559 213 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 SCG2P13521 617 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 TRMT44Q8IYL2 757 aaKnown RBP17.28■□□□□ 0.36
PHRF1-203ENST00000416188 ANKS4BQ8N8V4 417 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 FAM193BQ96PV7 902 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-203ENST00000416188 TEKT3Q9BXF9 490 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 CNTNAP4Q9C0A0 1308 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 UBXN2AP68543 259 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 XKR9Q5GH70 373 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 TMEM179Q6ZVK1 233 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 ZBTB8OSQ8IWT0 167 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-203ENST00000416188 PPM1EQ8WY54 764 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 ERO1AQ96HE7 468 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 M0R2C6 588 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 SH3RF3Q8TEJ3 882 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-203ENST00000416188 TXNDC16Q9P2K2 825 aa17.28■□□□□ 0.36
PHRF1-203ENST00000416188 BRD1O95696 1058 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 FRMPD1Q5SYB0 1578 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 USP17L5A8MUK1 530 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 STX10O60499 249 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 CDK8P49336 464 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 Q3C1V9 767 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 FAM160B2Q86V87 743 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 NELFCDQ8IXH7 590 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.36
PHRF1-203ENST00000416188 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.368e-6■■■□□ 18.5
PHRF1-203ENST00000416188 CYP2D7A0A087X1C5 515 aa17.27■□□□□ 0.35
PHRF1-203ENST00000416188 HDXQ7Z353 690 aa17.27■□□□□ 0.35
PHRF1-203ENST00000416188 COL23A1Q86Y22 540 aaPredicted RBP17.27■□□□□ 0.35
PHRF1-203ENST00000416188 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.35
PHRF1-203ENST00000416188 CARD6Q9BX69 1037 aa17.27■□□□□ 0.35
PHRF1-203ENST00000416188 BLZF1Q9H2G9 400 aa17.27■□□□□ 0.35
PHRF1-203ENST00000416188 RTEL1Q9NZ71 1219 aa17.27■□□□□ 0.35
PHRF1-203ENST00000416188 ADD1P35611 737 aaKnown RBP17.26■□□□□ 0.35
PHRF1-203ENST00000416188 FAM102BQ5T8I3 360 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 JAKMIP2Q96AA8 810 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 PUS7LQ9H0K6 701 aaKnown RBP17.26■□□□□ 0.35
PHRF1-203ENST00000416188 FER1L4A9Z1Z3 1794 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 CPDO75976 1380 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 KRT19P08727 400 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 CCDC121Q6ZUS5 278 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 CCDC26Q8TAB7 109 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 KIFAP3Q92845 792 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 MCAMP43121 646 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 INF2Q27J81 1249 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 CABP7Q86V35 215 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 MST1RQ04912 1400 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 QRICH2Q9H0J4 1663 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 NACA2Q9H009 215 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 MED14O60244 1454 aa17.26■□□□□ 0.35
PHRF1-203ENST00000416188 CALUO43852 315 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms