RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 SIRPGQ9P1W8 387 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 STRIP2Q9ULQ0 834 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 EFR3BQ9Y2G0 817 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 ACTL7BQ9Y614 415 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 SSH2Q76I76 1423 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 ANKARQ7Z5J8 1434 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 IMPDH2P12268 514 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 ETFBP38117 255 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 CDK8P49336 464 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 RING1Q06587 406 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 TXNRD1Q16881 649 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 PPM1JQ5JR12 505 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 ZBTB37Q5TC79 503 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 MEGF10Q96KG7 1140 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 MYRFLQ96LU7 910 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 UBL7Q96S82 380 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-204ENST00000415749 PCGF6Q9BYE7 350 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 TRIM55Q9BYV6 548 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 WNT10AQ9GZT5 417 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 GINM1Q9NU53 330 aa8.14□□□□□ -1.11
EPHA4-204ENST00000415749 PRR36Q9H6K5 1346 aa8.13□□□□□ -1.11
EPHA4-204ENST00000415749 U2SURPO15042 1029 aaKnown RBP8.13□□□□□ -1.11
EPHA4-204ENST00000415749 RNGTTO60942 597 aaKnown RBP8.13□□□□□ -1.11
EPHA4-204ENST00000415749 SOX9P48436 509 aa8.13□□□□□ -1.11
EPHA4-204ENST00000415749 TTLL4Q14679 1199 aa8.13□□□□□ -1.11
EPHA4-204ENST00000415749 FERD3LQ96RJ6 166 aa8.13□□□□□ -1.11
EPHA4-204ENST00000415749 SSU72Q9NP77 194 aaKnown RBP8.13□□□□□ -1.11
EPHA4-204ENST00000415749 PCDH12Q9NPG4 1184 aa8.13□□□□□ -1.11
EPHA4-204ENST00000415749 ADAM30Q9UKF2 790 aa8.13□□□□□ -1.11
EPHA4-204ENST00000415749 POLR3KQ9Y2Y1 108 aaPredicted RBP8.13□□□□□ -1.11
EPHA4-204ENST00000415749 ALS2Q96Q42 1657 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 DHX15O43143 795 aaKnown RBP8.12□□□□□ -1.11
EPHA4-204ENST00000415749 GRIN3BO60391 1043 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 DNAJC6O75061 913 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 ATE1O95260 518 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 PGRP06401 933 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 HCLS1P14317 486 aaPredicted RBP8.12□□□□□ -1.11
EPHA4-204ENST00000415749 PLCG1P19174 1290 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 GRK4P32298 578 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 DDB1Q16531 1140 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 GK5Q6ZS86 529 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 SMYD4Q8IYR2 804 aaPredicted RBP8.12□□□□□ -1.11
EPHA4-204ENST00000415749 CPLX3Q8WVH0 158 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 FAM105AQ9NUU6 356 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 PCOLCE2Q9UKZ9 415 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 PCDHB14Q9Y5E9 798 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 KNDC1Q76NI1 1749 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 TRPM3Q9HCF6 1732 aaPredicted RBP8.12□□□□□ -1.11
EPHA4-204ENST00000415749 IFT172Q9UG01 1749 aa8.12□□□□□ -1.11
EPHA4-204ENST00000415749 HTR3BO95264 441 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 BMP3P12645 472 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 HSPA6P17066 643 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 RAB6AP20340 208 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 MAP7Q14244 749 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 LRRFIP1Q32MZ4 808 aaKnown RBP8.11□□□□□ -1.11
EPHA4-204ENST00000415749 HID1Q8IV36 788 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 CRBNQ96SW2 442 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 ACSS3Q9H6R3 686 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 SPC25Q9HBM1 224 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 SNTG2Q9NY99 539 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 CASZ1Q86V15 1759 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 MYOM1P52179 1685 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 OVOS2A0A0G2JMS6 1433 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 OVOS2A0A0J9YW53 1432 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 PIK3C2GO75747 1445 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 OVOS2Q6IE36 1432 aa8.11□□□□□ -1.11
EPHA4-204ENST00000415749 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 PPP1R12AO14974 1030 aaPredicted RBP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 KLF4O43474 513 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 PARNO95453 639 aaKnown RBP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 GSK3AP49840 483 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 CHMP4BP1P59074 171 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 TMEM201Q5SNT2 666 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 ARMC10Q8N2F6 343 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 MARCH10Q8NA82 808 aaPredicted RBP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 HNRNPLLQ8WVV9 542 aaKnown RBP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 SSBP4Q9BWG4 385 aaPredicted RBP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 SRRTQ9BXP5 876 aaKnown RBP8.1□□□□□ -1.11
EPHA4-204ENST00000415749 KCNF1Q9H3M0 494 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 REV1Q9UBZ9 1251 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 SUGT1Q9Y2Z0 365 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 CEP350Q5VT06 3117 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 SPATA31E1Q6ZUB1 1445 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 MAP3K5Q99683 1374 aa8.1□□□□□ -1.11
EPHA4-204ENST00000415749 DLC1Q96QB1 1528 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 FAM221BA6H8Z2 402 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 GCP02774 474 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 NEFMP07197 916 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 MAP4P27816 1152 aaKnown RBP8.09□□□□□ -1.11
EPHA4-204ENST00000415749 CLCQ05315 142 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 RAB33AQ14088 237 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 SGO2Q562F6 1265 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 PLEKHG4Q58EX7 1191 aa8.09□□□□□ -1.11
EPHA4-204ENST00000415749 CCDC181Q5TID7 509 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms