RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TRIM7Q9C029 511 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 KAT14Q9H8E8 782 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 ANKZF1Q9H8Y5 726 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 SLC40A1Q9NP59 571 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 DENND2AQ9ULE3 1009 aa22.81■■□□□ 1.24
AP1S3-205ENST00000415298 FERP16591 822 aa22.8■■□□□ 1.24
AP1S3-205ENST00000415298 VIPAS39Q9H9C1 493 aa22.8■■□□□ 1.24
AP1S3-205ENST00000415298 SUGCTQ9HAC7 445 aa22.8■■□□□ 1.24
AP1S3-205ENST00000415298 IL1R1P14778 569 aa22.8■■□□□ 1.24
AP1S3-205ENST00000415298 NMIQ13287 307 aaPredicted RBP22.8■■□□□ 1.24
AP1S3-205ENST00000415298 YIPF3Q9GZM5 350 aa22.8■■□□□ 1.24
AP1S3-205ENST00000415298 CLSTN2Q9H4D0 955 aa22.8■■□□□ 1.24
AP1S3-205ENST00000415298 A0A0D9SFI3 127 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 SYF2O95926 243 aaKnown RBP22.79■■□□□ 1.24
AP1S3-205ENST00000415298 PDHBP11177 359 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 GRIK5Q16478 980 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 BZW1Q7L1Q6 419 aaKnown RBP22.79■■□□□ 1.24
AP1S3-205ENST00000415298 FAM228AQ86W67 206 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 KIAA0825Q8IV33 1275 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 TRIM58Q8NG06 486 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 RBM41Q96IZ5 413 aaKnown RBP22.79■■□□□ 1.24
AP1S3-205ENST00000415298 EYA3Q99504 573 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 MICALCLQ6ZW33 695 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 MIPOL1Q8TD10 442 aa22.79■■□□□ 1.24
AP1S3-205ENST00000415298 PAPOLBQ9NRJ5 636 aaKnown RBP22.79■■□□□ 1.24
AP1S3-205ENST00000415298 NFKBIEO00221 500 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 PPIP5K2O43314 1243 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 RNF8O76064 485 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 MAGEA10P43363 369 aaPredicted RBP22.78■■□□□ 1.24
AP1S3-205ENST00000415298 E2F5Q15329 346 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 ARMCX5Q6P1M9 558 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 MTHFD1LQ6UB35 978 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 TRIM4Q9C037 500 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 COA1Q9GZY4 146 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 DACT1Q9NYF0 836 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 MYH13Q9UKX3 1938 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 G3V3G9 751 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 EIF3HO15372 352 aaKnown RBP eCLIP22.78■■□□□ 1.24
AP1S3-205ENST00000415298 TUBB4BP68371 445 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 GTF2IP78347 998 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 DCAF8Q5TAQ9 597 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 IGSF22Q8N9C0 903 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 MXD3Q9BW11 206 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 TRPC6Q9Y210 931 aa22.78■■□□□ 1.24
AP1S3-205ENST00000415298 ZNF24P17028 368 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 PRDX5P30044 214 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 AKNAD1Q5T1N1 836 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 SLC9C2Q5TAH2 1124 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 ESYT1Q9BSJ8 1104 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 LRP2BPQ9P2M1 347 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 SEMA3EO15041 775 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 DEUP1Q05D60 604 aa22.77■■□□□ 1.24
AP1S3-205ENST00000415298 TTF1Q15361 905 aaPredicted RBP22.76■■□□□ 1.23
AP1S3-205ENST00000415298 ZFAND2BQ8WV99 257 aa22.76■■□□□ 1.23
AP1S3-205ENST00000415298 FBXW7Q969H0 707 aa22.76■■□□□ 1.23
AP1S3-205ENST00000415298 SPAG5Q96R06 1193 aa22.76■■□□□ 1.23
AP1S3-205ENST00000415298 CHMP4BP1P59074 171 aa22.76■■□□□ 1.23
AP1S3-205ENST00000415298 RASSF7Q02833 373 aa22.76■■□□□ 1.23
AP1S3-205ENST00000415298 CCDC129Q6ZRS4 1044 aa22.76■■□□□ 1.23
AP1S3-205ENST00000415298 ECE2O60344 883 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 PRELPP51888 382 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 PPFIA1Q13136 1202 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 SFMBT2Q5VUG0 894 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 SPTY2D1Q68D10 685 aaPredicted RBP22.75■■□□□ 1.23
AP1S3-205ENST00000415298 ZNF589Q86UQ0 364 aaPredicted RBP22.75■■□□□ 1.23
AP1S3-205ENST00000415298 FAM76AQ8TAV0 307 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 ZNF384Q8TF68 577 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 CCDC47Q96A33 483 aaKnown RBP22.75■■□□□ 1.23
AP1S3-205ENST00000415298 SCLT1Q96NL6 688 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 PNKPQ96T60 521 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 GORASP1Q9BQQ3 440 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 COL4A5P29400 1685 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 LRRIQ3A6PVS8 624 aaPredicted RBP22.75■■□□□ 1.23
AP1S3-205ENST00000415298 RNF113AO15541 343 aaKnown RBP22.75■■□□□ 1.23
AP1S3-205ENST00000415298 ATP6V1G1O75348 118 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 TUBBP07437 444 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 CCDC13Q8IYE1 715 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 MAGEB6Q8N7X4 407 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 OSBP2Q969R2 916 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 SAMM50Q9Y512 469 aa22.75■■□□□ 1.23
AP1S3-205ENST00000415298 GOLGA6L10A6NI86 522 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 YDJCA8MPS7 323 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 BECN2A8MW95 431 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 PDLIM1O00151 329 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 ZSCAN12O43309 604 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 SOGA3Q5TF21 947 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 CYB5D1Q6P9G0 228 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 CCDC170Q8IYT3 715 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 SUPT20HQ8NEM7 779 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 PUS7LQ9H0K6 701 aaKnown RBP22.74■■□□□ 1.23
AP1S3-205ENST00000415298 TAOK3Q9H2K8 898 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 DNAAF2Q9NVR5 837 aaKnown RBP22.74■■□□□ 1.23
AP1S3-205ENST00000415298 SRGAP1Q7Z6B7 1085 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 LARGE2Q8N3Y3 721 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 PHACTR1Q9C0D0 580 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 FER1L6Q2WGJ9 1857 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 SCN9AQ15858 1988 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 ZNF532Q9HCE3 1301 aa22.74■■□□□ 1.23
AP1S3-205ENST00000415298 LIN7AO14910 233 aaPredicted RBP22.73■■□□□ 1.23
AP1S3-205ENST00000415298 PPFIA3O75145 1194 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms