RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 IPO9Q96P70 1041 aaKnown RBP9.35□□□□□ -0.91
LINC00343-202ENST00000415294 BRINP2Q9C0B6 783 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 LGR6Q9HBX8 967 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 PRDM5Q9NQX1 630 aaPredicted RBP9.35□□□□□ -0.91
LINC00343-202ENST00000415294 FAM86C1Q9NVL1 165 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 PLAAQ9Y263 795 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 FHOD1Q9Y613 1164 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 C9orf84Q5VXU9 1444 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 ATP10BO94823 1461 aa9.35□□□□□ -0.91
LINC00343-202ENST00000415294 TRAV20A0A0B4J274 112 aa9.34□□□□□ -0.91
LINC00343-202ENST00000415294 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00343-202ENST00000415294 SHOXO15266 292 aa9.34□□□□□ -0.91
LINC00343-202ENST00000415294 OGFOD3Q6PK18 319 aa9.34□□□□□ -0.91
LINC00343-202ENST00000415294 ZCRB1Q8TBF4 217 aaKnown RBP9.34□□□□□ -0.91
LINC00343-202ENST00000415294 AARSD1Q9BTE6 412 aaKnown RBP9.34□□□□□ -0.91
LINC00343-202ENST00000415294 DIS3Q9Y2L1 958 aaKnown RBP9.34□□□□□ -0.91
LINC00343-202ENST00000415294 ZNF451Q9Y4E5 1061 aa9.34□□□□□ -0.91
LINC00343-202ENST00000415294 CPS1P31327 1500 aa9.34□□□□□ -0.91
LINC00343-202ENST00000415294 CYP27C1Q4G0S4 372 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 NOL9Q5SY16 702 aaKnown RBP9.33□□□□□ -0.92
LINC00343-202ENST00000415294 SFRP5Q5T4F7 317 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 ZNF227Q86WZ6 799 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 ARHGEF39Q8N4T4 335 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 LRRN4CLQ8ND94 238 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 SYTL5Q8TDW5 730 aaPredicted RBP9.33□□□□□ -0.92
LINC00343-202ENST00000415294 FBXL21Q9UKT6 434 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 RAXQ9Y2V3 346 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 SUGT1Q9Y2Z0 365 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 KIF27Q86VH2 1401 aa9.33□□□□□ -0.92
LINC00343-202ENST00000415294 ITGAVP06756 1048 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 FGFR1P11362 822 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 GRB10Q13322 594 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 TCOF1Q13428 1488 aaKnown RBP9.32□□□□□ -0.92
LINC00343-202ENST00000415294 ZAR1Q86SH2 424 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 SCUBE1Q8IWY4 988 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 PIWIL2Q8TC59 973 aaKnown RBP9.32□□□□□ -0.92
LINC00343-202ENST00000415294 FGD4Q96M96 766 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 CDC6Q99741 560 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 ARHGEF4Q9NR80 690 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 APEX2Q9UBZ4 518 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 EMC9Q9Y3B6 208 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 PLA2R1Q13018 1463 aa9.32□□□□□ -0.92
LINC00343-202ENST00000415294 DNAJC25-GNG10A0A024R161 153 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 FAM87AP0C7U9 286 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 PPP2R2AP63151 447 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 ENOX1Q8TC92 643 aaKnown RBP9.31□□□□□ -0.92
LINC00343-202ENST00000415294 PPP1R14AQ96A00 147 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 CCDC140Q96MF4 163 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 ASCC2Q9H1I8 757 aaPredicted RBP9.31□□□□□ -0.92
LINC00343-202ENST00000415294 SPC25Q9HBM1 224 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 STOML1Q9UBI4 398 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 AKT3Q9Y243 479 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 SF3B6Q9Y3B4 125 aaKnown RBP9.31□□□□□ -0.92
LINC00343-202ENST00000415294 RAPGEF2Q9Y4G8 1499 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 DNAJC6O75061 913 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 ASMTLO95671 621 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 CAPNS1P04632 268 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 ZNF865P0CJ78 1059 aaPredicted RBP9.31□□□□□ -0.92
LINC00343-202ENST00000415294 GATA4P43694 442 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 ZNF445P59923 1031 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 FAM214BQ7L5A3 538 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 TRIM59Q8IWR1 403 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 GATA6Q92908 595 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 MRGPRX3Q96LB0 322 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 TBC1D32Q96NH3 1257 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 DHRS4Q9BTZ2 278 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 C7orf69Q9H7B7 122 aa9.31□□□□□ -0.92
LINC00343-202ENST00000415294 CFAP74Q9C0B2 1584 aa9.3□□□□□ -0.92
LINC00343-202ENST00000415294 SHANK2Q9UPX8 1470 aa9.3□□□□□ -0.92
LINC00343-202ENST00000415294 SUPT6HQ7KZ85 1726 aaKnown RBP9.3□□□□□ -0.92
LINC00343-202ENST00000415294 SIGLEC6O43699 453 aa9.3□□□□□ -0.92
LINC00343-202ENST00000415294 RFPL3O75679 317 aa9.3□□□□□ -0.92
LINC00343-202ENST00000415294 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
LINC00343-202ENST00000415294 GYS2P54840 703 aa9.3□□□□□ -0.92
LINC00343-202ENST00000415294 CPSF6Q16630 551 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC00343-202ENST00000415294 DTWD2Q8NBA8 298 aa9.3□□□□□ -0.92
LINC00343-202ENST00000415294 KISS1RQ969F8 398 aaPredicted RBP9.3□□□□□ -0.92
LINC00343-202ENST00000415294 PRDM14Q9GZV8 571 aa9.3□□□□□ -0.92
LINC00343-202ENST00000415294 CGGBP1Q9UFW8 167 aaPredicted RBP9.3□□□□□ -0.92
LINC00343-202ENST00000415294 TRBV23-1A0A0A0MS06 115 aa9.29□□□□□ -0.92
LINC00343-202ENST00000415294 PPM1GO15355 546 aaPredicted RBP9.29□□□□□ -0.92
LINC00343-202ENST00000415294 LEFTY1O75610 366 aa9.29□□□□□ -0.92
LINC00343-202ENST00000415294 SUMO1P63165 101 aaKnown RBP9.29□□□□□ -0.92
LINC00343-202ENST00000415294 PTPROQ16827 1216 aa9.29□□□□□ -0.92
LINC00343-202ENST00000415294 MRPS23Q9Y3D9 190 aaKnown RBP9.29□□□□□ -0.92
LINC00343-202ENST00000415294 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 PLD2O14939 933 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 TKFCQ3LXA3 575 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 FNDC3BQ53EP0 1204 aaKnown RBP9.28□□□□□ -0.92
LINC00343-202ENST00000415294 DUSP27Q5VZP5 1158 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 RNF43Q68DV7 783 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 PRR23CQ6ZRP0 262 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 FIBCD1Q8N539 461 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 TP53INP1Q96A56 240 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 METTL22Q9BUU2 404 aaPredicted RBP9.28□□□□□ -0.92
LINC00343-202ENST00000415294 MRPL4Q9BYD3 311 aaKnown RBP9.28□□□□□ -0.92
LINC00343-202ENST00000415294 MKNK2Q9HBH9 465 aa9.28□□□□□ -0.92
LINC00343-202ENST00000415294 GSC2O15499 205 aa9.27□□□□□ -0.93
LINC00343-202ENST00000415294 PABPC1P11940 636 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms