RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 TRIM29Q14134 588 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 C2orf69Q8N8R5 385 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 PHF20Q9BVI0 1012 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 BARHL2Q9NY43 387 aa17.86■□□□□ 0.45
SHMT2-202ENST00000414700 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 BTBD18B2RXH4 712 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 FKBP1BP68106 108 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 HS1BP3Q53T59 392 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 SH3D19Q5HYK7 790 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 TREML2Q5T2D2 321 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 SLC10A4Q96EP9 437 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 FEM1BQ9UK73 627 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 PASKQ96RG2 1323 aa17.85■□□□□ 0.45
SHMT2-202ENST00000414700 MYH15Q9Y2K3 1946 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 FLOT1O75955 427 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 NR5A1Q13285 461 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 PPIL2Q13356 520 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 RBM46Q8TBY0 533 aaKnown RBP17.84■□□□□ 0.45
SHMT2-202ENST00000414700 CHURC1Q8WUH1 139 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 WNK4Q96J92 1243 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 LOC285556D6RIA3 1793 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 PDIA4P13667 645 aaKnown RBP17.84■□□□□ 0.45
SHMT2-202ENST00000414700 MKRN3Q13064 507 aaKnown RBP17.84■□□□□ 0.45
SHMT2-202ENST00000414700 DIS3L2Q8IYB7 885 aaKnown RBP17.84■□□□□ 0.45
SHMT2-202ENST00000414700 TMOD4Q9NZQ9 345 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 KCNH4Q9UQ05 1017 aa17.84■□□□□ 0.45
SHMT2-202ENST00000414700 COL11A1P12107 1806 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-202ENST00000414700 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.45
SHMT2-202ENST00000414700 PLA2G6O60733 806 aa17.83■□□□□ 0.45
SHMT2-202ENST00000414700 XBP1P17861 261 aa17.83■□□□□ 0.45
SHMT2-202ENST00000414700 NAPAP54920 295 aa17.83■□□□□ 0.45
SHMT2-202ENST00000414700 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.45
SHMT2-202ENST00000414700 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
SHMT2-202ENST00000414700 HUNKP57058 714 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 NLRP5P59047 1200 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 USH1GQ495M9 461 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 NOM1Q5C9Z4 860 aaKnown RBP17.82■□□□□ 0.44
SHMT2-202ENST00000414700 CCDC174Q6PII3 467 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 FAM160B2Q86V87 743 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 SLF1Q9BQI6 1058 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 GOLGA6L22H0YM25 854 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 YY1P25490 414 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 DNM1Q05193 864 aaKnown RBP17.82■□□□□ 0.44
SHMT2-202ENST00000414700 MOGSQ13724 837 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 GADL1Q6ZQY3 521 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 PRPF38AQ8NAV1 312 aaKnown RBP17.82■□□□□ 0.44
SHMT2-202ENST00000414700 RANBP17Q9H2T7 1088 aaKnown RBP17.82■□□□□ 0.44
SHMT2-202ENST00000414700 SH3GLB2Q9NR46 395 aa17.82■□□□□ 0.44
SHMT2-202ENST00000414700 FAM205CA6NFA0 338 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 CXCL11O14625 94 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 U2AF2P26368 475 aaKnown RBP eCLIP17.81■□□□□ 0.444e-8■■□□□ 14.1
SHMT2-202ENST00000414700 EARS2Q5JPH6 523 aaKnown RBP17.81■□□□□ 0.44
SHMT2-202ENST00000414700 CLEC17AQ6ZS10 378 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 ZNF784Q8NCA9 323 aaPredicted RBP17.81■□□□□ 0.44
SHMT2-202ENST00000414700 SMC1BQ8NDV3 1235 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 RASGRP4Q8TDF6 673 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 PPP1R9AQ9ULJ8 1098 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 PCDHA1Q9Y5I3 950 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 UNCXA6NJT0 531 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
SHMT2-202ENST00000414700 CATSPERGQ6ZRH7 1159 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 MTERF4Q7Z6M4 381 aaKnown RBP17.81■□□□□ 0.44
SHMT2-202ENST00000414700 SAPCD2Q86UD0 394 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 RGS22Q8NE09 1264 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 ATG4CQ96DT6 458 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 FTOQ9C0B1 505 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHMT2-202ENST00000414700 ZMYND12Q9H0C1 365 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 ZSCAN16Q9H4T2 348 aaPredicted RBP17.81■□□□□ 0.44
SHMT2-202ENST00000414700 GDPD2Q9HCC8 539 aa17.81■□□□□ 0.44
SHMT2-202ENST00000414700 ZNF536O15090 1300 aa17.8■□□□□ 0.44
SHMT2-202ENST00000414700 SMCO2A6NFE2 343 aa17.8■□□□□ 0.44
SHMT2-202ENST00000414700 TOMM70O94826 608 aa17.8■□□□□ 0.44
SHMT2-202ENST00000414700 KLHL40Q2TBA0 621 aa17.8■□□□□ 0.44
SHMT2-202ENST00000414700 FBXO11Q86XK2 927 aa17.8■□□□□ 0.44
SHMT2-202ENST00000414700 ZNF500O60304 480 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-202ENST00000414700 KRT2P35908 639 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 GNL2Q13823 731 aaKnown RBP17.79■□□□□ 0.44
SHMT2-202ENST00000414700 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
SHMT2-202ENST00000414700 NOSTRINQ8IVI9 506 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 CCDC148Q8NFR7 591 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 TNFRSF25Q93038 417 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 AMNQ9BXJ7 453 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
SHMT2-202ENST00000414700 PCDHA4Q9UN74 947 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 CNPY2Q9Y2B0 182 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 PEX10O60683 326 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 POTEEQ6S8J3 1075 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 SMAP1Q8IYB5 467 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-202ENST00000414700 BLIDQ8IZY5 108 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 PROCA1Q8NCQ7 364 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-202ENST00000414700 MS4A4AQ96JQ5 239 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 AGBL1Q96MI9 1066 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 FOXP1Q9H334 677 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-202ENST00000414700 SLC38A10Q9HBR0 1119 aa17.79■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L15C9J2P7 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L13C9JLJ4 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L11C9JVI0 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L18D6R9N7 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L22D6RA61 530 aa17.78■□□□□ 0.44
SHMT2-202ENST00000414700 USP17L17D6RBQ6 530 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms