RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CIAO1O76071 339 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 HNRNPCP07910 306 aaKnown RBP eCLIP10.64□□□□□ -0.711e-17■■□□□ 13.5
SNHG3-201ENST00000413987 POU3F3P20264 500 aaPredicted RBP10.64□□□□□ -0.71
SNHG3-201ENST00000413987 PTGS1P23219 599 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 CNGA1P29973 690 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 PUM3Q15397 648 aaKnown RBP10.64□□□□□ -0.71
SNHG3-201ENST00000413987 SLC10A5Q5PT55 438 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 RNF135Q8IUD6 432 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 VGLL2Q8N8G2 317 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 RBCK1Q9BYM8 510 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 IL25Q9H293 177 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 ECHDC1Q9NTX5 307 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 LRP5O75197 1615 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 AP5Z1O43299 807 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 STX6O43752 255 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 PIP5K1CO60331 668 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 NEMFO60524 1076 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 IGHMBP2P38935 993 aaKnown RBP10.63□□□□□ -0.71
SNHG3-201ENST00000413987 SF3B3Q15393 1217 aaKnown RBP10.63□□□□□ -0.71
SNHG3-201ENST00000413987 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 WDR45BQ5MNZ6 344 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 CCDC171Q6TFL3 1326 aa10.63□□□□□ -0.71
SNHG3-201ENST00000413987 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 CCDC85CA6NKD9 419 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 F13A1P00488 732 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 VARSP26640 1264 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 NAP1L1P55209 391 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 CTDSPL2Q05D32 466 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 CHRNDQ07001 517 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 SCARF1Q14162 830 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 TPD52L1Q16890 204 aaPredicted RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 STK11IPQ8N1F8 1099 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 RPGRQ92834 1020 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 TRMT2BQ96GJ1 504 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 XAGE2Q96GT9 111 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 C16orf45Q96MC5 204 aaPredicted RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 C2orf49Q9BVC5 232 aaPredicted RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 VGLL3A8MV65 326 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 PDE8BO95263 885 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 SKIP12755 728 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 PSMA3P25788 255 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 KLRK1P26718 216 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 ST13P50502 369 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 ST5P78524 1137 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 DALRD3Q5D0E6 543 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 CEP135Q66GS9 1140 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 CCDC186Q7Z3E2 898 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 SNX32Q86XE0 403 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 ANKRD18AQ8IVF6 992 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 BORCS6Q96GS4 357 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 ERO1AQ96HE7 468 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 TRIM55Q9BYV6 548 aa10.62□□□□□ -0.71
SNHG3-201ENST00000413987 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
SNHG3-201ENST00000413987 PSDA5PKW4 1024 aaPredicted RBP10.61□□□□□ -0.71
SNHG3-201ENST00000413987 DPYDQ12882 1025 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 ARL6IP6Q8N6S5 226 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 EPS8L1Q8TE68 723 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 UPF1Q92900 1129 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNHG3-201ENST00000413987 IWS1Q96ST2 819 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
SNHG3-201ENST00000413987 CREBZFQ9NS37 354 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 ANKRD31Q8N7Z5 1873 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 A6NCN8 305 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 KIF2AO00139 706 aaPredicted RBP10.61□□□□□ -0.71
SNHG3-201ENST00000413987 CHMLP26374 656 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 HALP42357 657 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 CD151P48509 253 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 MAP3K11Q16584 847 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 OCLNQ16625 522 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 ZSCAN25Q6NSZ9 544 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 MMS22LQ6ZRQ5 1243 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 C16orf86Q6ZW13 317 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 PRKD2Q9BZL6 878 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 SH3GLB2Q9NR46 395 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 CXXC1Q9P0U4 656 aaPredicted RBP10.61□□□□□ -0.71
SNHG3-201ENST00000413987 SEPT3Q9UH03 358 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 PARP3Q9Y6F1 533 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 RTL9Q8NET4 1388 aa10.61□□□□□ -0.71
SNHG3-201ENST00000413987 TTC41PQ6P2S7 1318 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 GTPBP10A4D1E9 387 aaKnown RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 GLRX3O76003 335 aaKnown RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 CAVIN2O95810 425 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 F2P00734 622 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 NCAM1P13591 858 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 CDC25BP30305 580 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 RPS8P62241 208 aaKnown RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 R3HDM1Q15032 1099 aaKnown RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 IL31Q6EBC2 164 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 DDX42Q86XP3 938 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 ENAHQ8N8S7 591 aaPredicted RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 ITFG2Q969R8 447 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 MINPP1Q9UNW1 487 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms