RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CCDC155Q8N6L0 562 aa16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 PROCA1Q8NCQ7 364 aaPredicted RBP16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 ZNF507Q8TCN5 953 aa16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 TBC1D8BQ0IIM8 1120 aa16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 PTPROQ16827 1216 aa16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 CCDC96Q2M329 555 aa16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 CCNI2Q6ZMN8 369 aaPredicted RBP16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 TSEN2Q8NCE0 465 aaKnown RBP16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 MS4A14Q96JA4 679 aa16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 DUSP9Q99956 384 aaKnown RBP16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 RIOK1Q9BRS2 568 aaKnown RBP16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 FAM207AQ9NSI2 230 aaPredicted RBP16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 ADAMTSL3P82987 1691 aa16.33■□□□□ 0.2
SEMA3F-202ENST00000413852 PNPLA7Q6ZV29 1317 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 ESYT3A0FGR9 886 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 GOLGA8HP0CJ92 632 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 SCG2P13521 617 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 ARL8AQ96BM9 186 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 TNS2Q63HR2 1409 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 ATP1A2P50993 1020 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 STK4Q13043 487 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 TSR1Q2NL82 804 aaKnown RBP16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 C4orf32Q8N8J7 132 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 NID2Q14112 1375 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 RTL9Q8NET4 1388 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 KLRC4O43908 158 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 MAGEA9P43362 315 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 KCNQ4P56696 695 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 IQCA1Q86XH1 822 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 DNAJC7Q99615 494 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 SALL4Q9UJQ4 1053 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 CAPN11Q9UMQ6 739 aa16.32■□□□□ 0.2
SEMA3F-202ENST00000413852 GNAT2P19087 354 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 CORO7P57737 925 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 MED4Q9NPJ6 270 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 TFCP2L1Q9NZI6 479 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 BUB1O43683 1085 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 MTIF2P46199 727 aaKnown RBP16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 APBA1Q02410 837 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 PAPD7Q5XG87 772 aaKnown RBP16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 KAT2BQ92831 832 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 DYNLL2Q96FJ2 89 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
SEMA3F-202ENST00000413852 GOLGA6CA6NDK9 693 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 GOLGA6BA6NDN3 693 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 EXOC5O00471 708 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 GOLGA6DP0CG33 693 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 TRADDQ15628 312 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 FBXW10Q5XX13 1052 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 GOLGA6AQ9NYA3 693 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 IRAK1P51617 712 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 GTF2A1P52655 376 aaPredicted RBP16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 SLC35G1Q2M3R5 365 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 MAGEC2Q9UBF1 373 aaPredicted RBP16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 COL1A1P02452 1464 aaPredicted RBP16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 H7C1D1 291 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 SPAG1Q07617 926 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 TTI2Q6NXR4 508 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 BICDL1Q6ZP65 573 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 ACSBG1Q96GR2 724 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 SLC39A2Q9NP94 309 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 MYO1AQ9UBC5 1043 aa16.3■□□□□ 0.2
SEMA3F-202ENST00000413852 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 USP17L8P0C7I0 530 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 IGHMBP2P38935 993 aaKnown RBP16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 AARSP49588 968 aaKnown RBP eCLIP16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 JRKLQ9Y4A0 524 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 KRT86O43790 486 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 GNGT1P63211 74 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 PDCLQ13371 301 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 TUBB2AQ13885 445 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 CREG2Q8IUH2 290 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 GLIS3Q8NEA6 775 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 TUBB2BQ9BVA1 445 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 CARD10Q9BWT7 1032 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 EXOC1Q9NV70 894 aa16.29■□□□□ 0.2
SEMA3F-202ENST00000413852 USP17L3A6NCW0 530 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 USP17L4A6NCW7 530 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 TSPY2A6NKD2 308 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 RPS6KA5O75582 802 aa16.28■□□□□ 0.2
SEMA3F-202ENST00000413852 UBA7P41226 1012 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms