RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 GLT8D2Q9H1C3 349 aa9.45□□□□□ -0.9
HDAC9-207ENST00000413509 RANBP17Q9H2T7 1088 aaKnown RBP9.45□□□□□ -0.9
HDAC9-207ENST00000413509 GOLPH3LQ9H4A5 285 aa9.45□□□□□ -0.9
HDAC9-207ENST00000413509 VAT1LQ9HCJ6 419 aa9.45□□□□□ -0.9
HDAC9-207ENST00000413509 C6orf50Q9HD87 102 aa9.45□□□□□ -0.9
HDAC9-207ENST00000413509 DDX19AQ9NUU7 478 aaKnown RBP9.45□□□□□ -0.9
HDAC9-207ENST00000413509 FBXO2Q9UK22 296 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-207ENST00000413509 FEM1BQ9UK73 627 aa9.45□□□□□ -0.9
HDAC9-207ENST00000413509 NOL7Q9UMY1 257 aaKnown RBP9.45□□□□□ -0.9
HDAC9-207ENST00000413509 CEP131Q9UPN4 1083 aa9.45□□□□□ -0.9
HDAC9-207ENST00000413509 PCDHB6Q9Y5E3 794 aa9.45□□□□□ -0.9
HDAC9-207ENST00000413509 SMCO2A6NFE2 343 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 TMEM232C9JQI7 657 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 WDR46O15213 610 aaKnown RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 CUTAO60888 179 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 USP2O75604 605 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 ADCY7P51828 1080 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 STAT2P52630 851 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 ATP2C1P98194 919 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 FAM160A1Q05DH4 1040 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 ORC2Q13416 577 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 TTC38Q5R3I4 469 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 FAM83BQ5T0W9 1011 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 RESP18Q5W5W9 173 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 PIK3AP1Q6ZUJ8 805 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 FAM160B2Q86V87 743 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 REXO1Q8N1G1 1221 aaKnown RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 C4orf32Q8N8J7 132 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 KRI1Q8N9T8 703 aaKnown RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 CHURC1Q8WUH1 139 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 MRPS27Q92552 414 aaKnown RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 COA7Q96BR5 231 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 DCPSQ96C86 337 aaKnown RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 WRNIP1Q96S55 665 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 CLSTN2Q9H4D0 955 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 TAF1DQ9H5J8 278 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 HPSEQ9Y251 543 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 SRPRBQ9Y5M8 271 aaKnown RBP9.44□□□□□ -0.9
HDAC9-207ENST00000413509 LOC285556D6RIA3 1793 aa9.44□□□□□ -0.9
HDAC9-207ENST00000413509 SMCHD1A6NHR9 2005 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 IQCA1LA6NCM1 817 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 GOLGA6L4A6NEF3 574 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 ADM5C9JUS6 153 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 EDIL3O43854 480 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 NR1I2O75469 434 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 LETM1O95202 739 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-207ENST00000413509 USP14P54578 494 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 BACE1P56817 501 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 MAP3K11Q16584 847 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 PRAMEF18Q5VWM3 479 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 SHC4Q6S5L8 630 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 CCDC84Q86UT8 332 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-207ENST00000413509 SULF1Q8IWU6 871 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 CCAR1Q8IX12 1150 aaKnown RBP9.43□□□□□ -0.9
HDAC9-207ENST00000413509 SPICE1Q8N0Z3 855 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 FSIP1Q8NA03 581 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 RASGRP4Q8TDF6 673 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 CUL5Q93034 780 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 FERMT2Q96AC1 680 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 AMNQ9BXJ7 453 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 EMILIN3Q9NT22 766 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 DACT1Q9NYF0 836 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 SNCAIPQ9Y6H5 919 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 MYH7BA7E2Y1 1941 aa9.43□□□□□ -0.9
HDAC9-207ENST00000413509 RBBP6Q7Z6E9 1792 aaKnown RBP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 CCDC194A0A1B0GVG4 234 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 PIK3CDO00329 1044 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 OPLAHO14841 1288 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 VCAM1P19320 739 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 MRPL12P52815 198 aaKnown RBP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 GHRHRQ02643 423 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 TRAF1Q13077 416 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 NONOQ15233 471 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 SH3D19Q5HYK7 790 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 ARL6IP4Q66PJ3 421 aaKnown RBP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 MCTP2Q6DN12 878 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 LRSAM1Q6UWE0 723 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 PNMA8AQ86V59 439 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 GAS2L3Q86XJ1 694 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 FBXO11Q86XK2 927 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 CRYGNQ8WXF5 182 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 ZKSCAN4Q969J2 545 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-207ENST00000413509 CDCA5Q96FF9 252 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 FEZ1Q99689 392 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 FUCA2Q9BTY2 467 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 AS3MTQ9HBK9 375 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 PICK1Q9NRD5 415 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 AFG3L2Q9Y4W6 797 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 PCDHA1Q9Y5I3 950 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 A0A0G2JMZ2 1700 aa9.42□□□□□ -0.9
HDAC9-207ENST00000413509 ZNF536O15090 1300 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms