RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 POTEEQ6S8J3 1075 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 BADQ92934 168 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 PORCNQ9H237 461 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 RBPJLQ9UBG7 517 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 PRKAG2Q9UGJ0 569 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 FRMPD3Q5JV73 1810 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 GAKO14976 1311 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 STK36Q9NRP7 1315 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 SYCE3A1L190 88 aa19.78■□□□□ 0.76
PTPRC-206ENST00000413409 TBC1D12O60347 775 aa19.78■□□□□ 0.76
PTPRC-206ENST00000413409 FDPSP14324 419 aaKnown RBP19.78■□□□□ 0.76
PTPRC-206ENST00000413409 NT5C2P49902 561 aa19.78■□□□□ 0.76
PTPRC-206ENST00000413409 PICALMQ13492 652 aa19.78■□□□□ 0.76
PTPRC-206ENST00000413409 GPRC5AQ8NFJ5 357 aa19.78■□□□□ 0.76
PTPRC-206ENST00000413409 LEO1Q8WVC0 666 aaPredicted RBP19.78■□□□□ 0.76
PTPRC-206ENST00000413409 CFAP45Q9UL16 551 aa19.78■□□□□ 0.76
PTPRC-206ENST00000413409 TACC3Q9Y6A5 838 aa19.78■□□□□ 0.76
PTPRC-206ENST00000413409 ZBTB43O43298 467 aa19.77■□□□□ 0.76
PTPRC-206ENST00000413409 KDM4AO75164 1064 aa19.77■□□□□ 0.76
PTPRC-206ENST00000413409 NASPP49321 788 aaPredicted RBP19.77■□□□□ 0.76
PTPRC-206ENST00000413409 SPATA32Q96LK8 384 aa19.77■□□□□ 0.76
PTPRC-206ENST00000413409 PANK2Q9BZ23 570 aa19.77■□□□□ 0.76
PTPRC-206ENST00000413409 CRNKL1Q9BZJ0 848 aaKnown RBP19.77■□□□□ 0.76
PTPRC-206ENST00000413409 FLRT1Q9NZU1 646 aa19.77■□□□□ 0.76
PTPRC-206ENST00000413409 ORC3Q9UBD5 711 aaPredicted RBP19.77■□□□□ 0.76
PTPRC-206ENST00000413409 ATP11BQ9Y2G3 1177 aa19.77■□□□□ 0.76
PTPRC-206ENST00000413409 IFIT3O14879 490 aaKnown RBP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 FGRP09769 529 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 RGS2P41220 211 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 GPR142Q7Z601 462 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 TMTC2Q8N394 836 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 SDR42E1Q8WUS8 393 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 ZNF396Q96N95 335 aaPredicted RBP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 OSBPL5Q9H0X9 879 aaPredicted RBP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 ATP8A2Q9NTI2 1148 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 ZSWIM5Q9P217 1185 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 MYH2Q9UKX2 1941 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 GOLGA8AA7E2F4 631 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 MAPK4P31152 587 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 HOXA7P31268 230 aaPredicted RBP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 HERVK_113P62684 666 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 DYNLL1P63167 89 aaKnown RBP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 IRX3P78415 501 aaPredicted RBP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 GSTO1P78417 241 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 FAM173BQ6P4H8 233 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 NFXL1Q6ZNB6 911 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 SH3RF1Q7Z6J0 888 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 DZIP1Q86YF9 867 aaKnown RBP19.76■□□□□ 0.75
PTPRC-206ENST00000413409 CERS3Q8IU89 383 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 ESR2Q92731 530 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 C8orf76Q96K31 380 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 APBA2Q99767 749 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 TSPY26PQ9H489 355 aa19.76■□□□□ 0.75
PTPRC-206ENST00000413409 BAZ2AQ9UIF9 1905 aaKnown RBP19.75■□□□□ 0.75
PTPRC-206ENST00000413409 ERICH2A1L162 156 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 TRIM43BA6NCK2 446 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 CCDC69A6NI79 296 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 USP17L5A8MUK1 530 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 CAP2P40123 477 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 EPHB4P54760 987 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 WTAPQ15007 396 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 SBK1Q52WX2 424 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 SYNE3Q6ZMZ3 975 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 BRAPQ7Z569 592 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 PLEKHH3Q7Z736 793 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 FBXO18Q8NFZ0 1043 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 LPAR1Q92633 364 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 TRIM43Q96BQ3 446 aaPredicted RBP19.75■□□□□ 0.75
PTPRC-206ENST00000413409 PRDM5Q9NQX1 630 aaPredicted RBP19.75■□□□□ 0.75
PTPRC-206ENST00000413409 ARPP21Q9UBL0 812 aaPredicted RBP19.75■□□□□ 0.75
PTPRC-206ENST00000413409 DDX20Q9UHI6 824 aaKnown RBP19.75■□□□□ 0.75
PTPRC-206ENST00000413409 SLC12A7Q9Y666 1083 aa19.75■□□□□ 0.75
PTPRC-206ENST00000413409 NAV1Q8NEY1 1877 aa19.74■□□□□ 0.75
PTPRC-206ENST00000413409 DNM1LO00429 736 aa19.74■□□□□ 0.75
PTPRC-206ENST00000413409 ADD1P35611 737 aaKnown RBP19.74■□□□□ 0.75
PTPRC-206ENST00000413409 RHBDL3P58872 404 aa19.74■□□□□ 0.75
PTPRC-206ENST00000413409 ERVK-9P63128 1117 aa19.74■□□□□ 0.75
PTPRC-206ENST00000413409 ERVK-24P63145 666 aa19.74■□□□□ 0.75
PTPRC-206ENST00000413409 SLC39A5Q6ZMH5 540 aa19.74■□□□□ 0.75
PTPRC-206ENST00000413409 MICU3Q86XE3 530 aa19.74■□□□□ 0.75
PTPRC-206ENST00000413409 ORC4O43929 436 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 BTDP43251 543 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 JAG1P78504 1218 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 CCDC173Q0VFZ6 552 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 MAP2K5Q13163 448 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 MTMR2Q13614 643 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 GJC2Q5T442 439 aaPredicted RBP19.73■□□□□ 0.75
PTPRC-206ENST00000413409 TRPV1Q8NER1 839 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 ADAMTS19Q8TE59 1207 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 FAM163AQ96GL9 167 aaPredicted RBP19.73■□□□□ 0.75
PTPRC-206ENST00000413409 UBAC1Q9BSL1 405 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 RBSNQ9H1K0 784 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 SENP2Q9HC62 589 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 PDLIM7Q9NR12 457 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 DDX19AQ9NUU7 478 aaKnown RBP19.73■□□□□ 0.75
PTPRC-206ENST00000413409 RCOR1Q9UKL0 485 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTPRC-206ENST00000413409 RLFQ13129 1914 aa19.73■□□□□ 0.75
PTPRC-206ENST00000413409 CHD9Q3L8U1 2897 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms