RNA–Protein interactions for RNA: ENST00000413388.2

SLC9A3R1-202, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2 BASIC

Gene SLC9A3R1, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-202ENST00000413388 HAND2P61296 217 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 NUCB1Q02818 461 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TKFCQ3LXA3 575 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 CCDC174Q6PII3 467 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 MAMDC4Q6UXC1 1216 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 MFSD6Q6ZSS7 791 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 DCAF4Q8WV16 495 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SPC25Q9HBM1 224 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 DIAPH3Q9NSV4 1193 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 RNF146Q9NTX7 359 aa20.69■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SOX1O00570 391 aaPredicted RBP20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SDSP20132 328 aa20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 ACVR2BQ13705 512 aa20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TRIM60Q495X7 471 aa20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 ZNF589Q86UQ0 364 aaPredicted RBP20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 AGBL1Q96MI9 1066 aa20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TRERF1Q96PN7 1200 aa20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.68■□□□□ 0.9
SLC9A3R1-202ENST00000413388 HIP1O00291 1037 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SNAI1O95863 264 aaPredicted RBP20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 FGRP09769 529 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TOP1P11387 765 aaKnown RBP20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 LRIT3Q3SXY7 679 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 PLEKHM2Q8IWE5 1019 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 LENG1Q96BZ8 264 aaPredicted RBP20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 ABHD16BQ9H3Z7 469 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 PRR12Q9ULL5 1215 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 PHF24Q9UPV7 400 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 ZMYM6O95789 1325 aa20.67■□□□□ 0.9
SLC9A3R1-202ENST00000413388 PCP11498 1178 aaKnown RBP20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SNAP25P60880 206 aa20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 AKNAD1Q5T1N1 836 aa20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 CWC27Q6UX04 472 aaKnown RBP20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 ARMCX2Q7L311 632 aa20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 NUP133Q8WUM0 1156 aa20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 OSBPL3Q9H4L5 887 aa20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 CCPG1Q9ULG6 757 aa20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SZT2Q5T011 3432 aa20.66■□□□□ 0.9
SLC9A3R1-202ENST00000413388 ZNF213O14771 459 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 DUSP11O75319 330 aaKnown RBP20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 CNTN2Q02246 1040 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SNX17Q15036 470 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 CCDC144CPQ8IYA2 1237 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 VTI1AQ96AJ9 217 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TMEM47Q9BQJ4 181 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TSEN34Q9BSV6 310 aaKnown RBP20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TCP11L1Q9NUJ3 509 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 TACC3Q9Y6A5 838 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 SMCHD1A6NHR9 2005 aa20.65■□□□□ 0.9
SLC9A3R1-202ENST00000413388 ZNF536O15090 1300 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 SYNRGQ9UMZ2 1314 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 A0A1W2PQ45 241 aaPredicted RBP20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 A0A1W2PQY0 241 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 ASB14A6NK59 587 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 C6orf222P0C671 652 aaPredicted RBP20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 C1orf53Q5VUE5 145 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 ESR2Q92731 530 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 GPCPD1Q9NPB8 672 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 A1CFQ9NQ94 594 aaKnown RBP20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 STARD7Q9NQZ5 370 aa20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 SUPT16HQ9Y5B9 1047 aaKnown RBP20.64■□□□□ 0.89
SLC9A3R1-202ENST00000413388 FRMPD2Q68DX3 1309 aaPredicted RBP20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 PQBP1O60828 265 aaKnown RBP20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 ADAMTS4O75173 837 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 SLC16A2P36021 539 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 NOVP48745 357 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 ACLYP53396 1101 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 TLE2Q04725 743 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 KCNA10Q16322 511 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 CCDC144BQ3MJ40 725 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 SYDE2Q5VT97 1194 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 GPR153Q6NV75 609 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 NSMFQ6X4W1 530 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 RASGRP2Q7LDG7 609 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 PCSK9Q8NBP7 692 aaKnown RBP20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 TTC14Q96N46 770 aa20.63■□□□□ 0.89
SLC9A3R1-202ENST00000413388 MOXD2PA6NHM9 499 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 ICAM1P05362 532 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 CLTBP09497 229 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 TTBK2Q6IQ55 1244 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 DEFB123Q8N688 67 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 FAM133AQ8N9E0 248 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 GLT1D1Q96MS3 346 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 PDLIM7Q9NR12 457 aa20.62■□□□□ 0.89
SLC9A3R1-202ENST00000413388 DCDC2CA8MYV0 355 aa20.61■□□□□ 0.89
SLC9A3R1-202ENST00000413388 IQCA1Q86XH1 822 aa20.61■□□□□ 0.89
SLC9A3R1-202ENST00000413388 BADQ92934 168 aa20.61■□□□□ 0.89
SLC9A3R1-202ENST00000413388 RANBP17Q9H2T7 1088 aaKnown RBP20.61■□□□□ 0.89
SLC9A3R1-202ENST00000413388 PNMA2Q9UL42 364 aa20.61■□□□□ 0.89
SLC9A3R1-202ENST00000413388 RAG1P15918 1043 aa20.6■□□□□ 0.89
SLC9A3R1-202ENST00000413388 TNFAIP2Q03169 654 aa20.6■□□□□ 0.89
SLC9A3R1-202ENST00000413388 IMMTQ16891 758 aaKnown RBP20.6■□□□□ 0.89
SLC9A3R1-202ENST00000413388 CCDC178Q5BJE1 867 aa20.6■□□□□ 0.89
SLC9A3R1-202ENST00000413388 MUM1L1Q5H9M0 696 aa20.6■□□□□ 0.89
SLC9A3R1-202ENST00000413388 GNASQ5JWF2 1037 aa20.6■□□□□ 0.89
SLC9A3R1-202ENST00000413388 BTNL9Q6UXG8 535 aa20.6■□□□□ 0.89
SLC9A3R1-202ENST00000413388 TBC1D10CQ8IV04 446 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms