RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-202ENST00000413219 SMIM22K7EJ46 135 aa19.73■□□□□ 0.75
SDCBP-202ENST00000413219 KLRC4O43908 158 aa19.73■□□□□ 0.75
SDCBP-202ENST00000413219 FIGNQ5HY92 759 aa19.73■□□□□ 0.75
SDCBP-202ENST00000413219 SUSD4Q5VX71 490 aa19.73■□□□□ 0.75
SDCBP-202ENST00000413219 ZNF572Q7Z3I7 529 aaPredicted RBP19.73■□□□□ 0.75
SDCBP-202ENST00000413219 FAM107BQ9H098 131 aa19.73■□□□□ 0.75
SDCBP-202ENST00000413219 GNL3LQ9NVN8 582 aaKnown RBP19.73■□□□□ 0.75
SDCBP-202ENST00000413219 A0A1W2PQJ5 194 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 SRGAP2O75044 1071 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 PMS1P54277 932 aaKnown RBP19.72■□□□□ 0.75
SDCBP-202ENST00000413219 NAALADL2Q58DX5 795 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 BRINP3Q76B58 766 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 AMOTL1Q8IY63 956 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 BLIDQ8IZY5 108 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 CAGE1Q8TC20 777 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 SELENOOQ9BVL4 669 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 NHEJ1Q9H9Q4 299 aaPredicted RBP19.72■□□□□ 0.75
SDCBP-202ENST00000413219 EIF5P55010 431 aaKnown RBP19.72■□□□□ 0.75
SDCBP-202ENST00000413219 CHRNDQ07001 517 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 TTC31Q49AM3 519 aaPredicted RBP19.72■□□□□ 0.75
SDCBP-202ENST00000413219 DNAJC21Q5F1R6 531 aaKnown RBP19.72■□□□□ 0.75
SDCBP-202ENST00000413219 FAM114A1Q8IWE2 563 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 MMGT1Q8N4V1 131 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 CAPZA3Q96KX2 299 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 CCSER1Q9C0I3 900 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 MAGEF1Q9HAY2 307 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 KBTBD4Q9NVX7 518 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 RNF216Q9NWF9 866 aaPredicted RBP19.72■□□□□ 0.75
SDCBP-202ENST00000413219 ABCF2Q9UG63 623 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 FAM184BQ9ULE4 1060 aa19.72■□□□□ 0.75
SDCBP-202ENST00000413219 CACNA1SQ13698 1873 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 PES1O00541 588 aaKnown RBP19.71■□□□□ 0.75
SDCBP-202ENST00000413219 GGCXP38435 758 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 PPP1R2P41236 205 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 VAV2P52735 878 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 SF3B2Q13435 895 aaKnown RBP19.71■□□□□ 0.75
SDCBP-202ENST00000413219 PARP10Q53GL7 1025 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 EFCAB13Q8IY85 973 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 AENQ8WTP8 325 aaKnown RBP19.71■□□□□ 0.75
SDCBP-202ENST00000413219 TUBGCP2Q9BSJ2 902 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 LACRTQ9GZZ8 138 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 CUEDC2Q9H467 287 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 CYP2D7A0A087X1C5 515 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 BICDL2A1A5D9 508 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 AGPSO00116 658 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 CPP00450 1065 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 TRIM21P19474 475 aaKnown RBP19.71■□□□□ 0.75
SDCBP-202ENST00000413219 KIF5BP33176 963 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 DTHD1Q6ZMT9 781 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 FAM76AQ8TAV0 307 aa19.71■□□□□ 0.75
SDCBP-202ENST00000413219 RCCD1A6NED2 376 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 B4DLN1 442 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 IDEP14735 1019 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 PRLRP16471 622 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 KIF5AQ12840 1032 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 TRIM58Q8NG06 486 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 SECISBP2LQ93073 1101 aaKnown RBP19.7■□□□□ 0.74
SDCBP-202ENST00000413219 ZBTB9Q96C00 473 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 DUSP9Q99956 384 aaKnown RBP19.7■□□□□ 0.74
SDCBP-202ENST00000413219 PCDHA4Q9UN74 947 aa19.7■□□□□ 0.74
SDCBP-202ENST00000413219 RASSF10A6NK89 507 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 PDE2AO00408 941 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-202ENST00000413219 LAD1O00515 517 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 CCNE1P24864 410 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 DYNLL1P63167 89 aaKnown RBP19.69■□□□□ 0.74
SDCBP-202ENST00000413219 TBC1D8BQ0IIM8 1120 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 CSGALNACT2Q8N6G5 542 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 CCDC47Q96A33 483 aaKnown RBP19.69■□□□□ 0.74
SDCBP-202ENST00000413219 ERGIC2Q96RQ1 377 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 AGPAT5Q9NUQ2 364 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 TFR2Q9UP52 801 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 JRKLQ9Y4A0 524 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 GOLGA6BA6NDN3 693 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-202ENST00000413219 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-202ENST00000413219 MYBL2P10244 700 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 GBP6Q6ZN66 633 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 ZFP91Q96JP5 570 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-202ENST00000413219 SNX12Q9UMY4 172 aa19.69■□□□□ 0.74
SDCBP-202ENST00000413219 GOLGA6CA6NDK9 693 aa19.68■□□□□ 0.74
SDCBP-202ENST00000413219 GOLGA6DP0CG33 693 aa19.68■□□□□ 0.74
SDCBP-202ENST00000413219 HNRNPH3P31942 346 aaKnown RBP19.68■□□□□ 0.74
SDCBP-202ENST00000413219 PRPHP41219 470 aa19.68■□□□□ 0.74
SDCBP-202ENST00000413219 UBA7P41226 1012 aa19.68■□□□□ 0.74
SDCBP-202ENST00000413219 ZSCAN29Q8IWY8 852 aaPredicted RBP19.68■□□□□ 0.74
SDCBP-202ENST00000413219 P2RX5Q93086 422 aa19.68■□□□□ 0.74
SDCBP-202ENST00000413219 GOLGA6AQ9NYA3 693 aa19.68■□□□□ 0.74
SDCBP-202ENST00000413219 LAMB2P55268 1798 aa19.68■□□□□ 0.74
SDCBP-202ENST00000413219 COL1A1P02452 1464 aaPredicted RBP19.68■□□□□ 0.74
SDCBP-202ENST00000413219 USP17L12C9JPN9 530 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 USP17L21D6R901 530 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 ADAMTS3O15072 1205 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 USO1O60763 962 aaKnown RBP19.67■□□□□ 0.74
SDCBP-202ENST00000413219 NT5C2P49902 561 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 PPFIA1Q13136 1202 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 SPA17Q15506 151 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 GALNT17Q6IS24 598 aa19.67■□□□□ 0.74
SDCBP-202ENST00000413219 DAGLBQ8NCG7 672 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms