RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CBX8Q9HC52 389 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 SERTAD1Q9UHV2 236 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 KCNH3Q9ULD8 1083 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
HMGN1P34-201ENST00000413023 TMEM232C9JQI7 657 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 ZBTB5O15062 677 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 CTAGE5O15320 804 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 ACTN4O43707 911 aaKnown RBP9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 RAD21O60216 631 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 KINO60870 393 aaKnown RBP9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 CCDC192P0DO97 292 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 SLC1A4P43007 532 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 SYKP43405 635 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 TRAPPC10P48553 1259 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 IQCB1Q15051 598 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 UBE2SQ16763 222 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 KIF4BQ2VIQ3 1234 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 GPATCH4Q5T3I0 446 aaKnown RBP9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 LUZP1Q86V48 1076 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 SPICE1Q8N0Z3 855 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 FAM177A1Q8N128 213 aaPredicted RBP9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 JMYQ8N9B5 988 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 SDF4Q9BRK5 362 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 DNAJC25Q9H1X3 360 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 BRMS1Q9HCU9 246 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 C6orf50Q9HD87 102 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 NOL7Q9UMY1 257 aaKnown RBP9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 FZD1Q9UP38 647 aa9.86□□□□□ -0.83
HMGN1P34-201ENST00000413023 CCDC194A0A1B0GVG4 234 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 MYO1BO43795 1136 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 DDNO94850 711 aaPredicted RBP9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 BMP3P12645 472 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 LMNB1P20700 586 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 CDC25AP30304 524 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 INPP5BP32019 993 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 CLK2P49760 499 aaKnown RBP9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 MMP14P50281 582 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 PNOCQ13519 176 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 DGKZQ13574 1117 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 PPP4R3BQ5MIZ7 849 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 FAM83BQ5T0W9 1011 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 ISM2Q6H9L7 571 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 KRT25Q7Z3Z0 450 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 SH3RF1Q7Z6J0 888 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 GRAMD1CQ8IYS0 662 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 CCDC148Q8NFR7 591 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 TBC1D5Q92609 795 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 PDLIM2Q96JY6 352 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 DEFB129Q9H1M3 183 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 RIC8AQ9NPQ8 531 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 GPRC5DQ9NZD1 345 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 KIAA1468Q9P260 1216 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 SEC63Q9UGP8 760 aaKnown RBP9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 TUBE1Q9UJT0 475 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 PRR12Q9ULL5 1215 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 CEP131Q9UPN4 1083 aa9.85□□□□□ -0.83
HMGN1P34-201ENST00000413023 VWA3AA6NCI4 1184 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 PP2D1A8MPX8 630 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L15C9J2P7 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L13C9JLJ4 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L11C9JVI0 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L18D6R9N7 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L22D6RA61 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L17D6RBQ6 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L19D6RCP7 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L20D6RJB6 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 BIN1O00499 593 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 OPLAHO14841 1288 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 POLR2DO15514 142 aaKnown RBP9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 BMP6P22004 513 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 SARSP49591 514 aaKnown RBP9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L24Q0WX57 530 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 NONOQ15233 471 aaKnown RBP eCLIP9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 CDC37Q16543 378 aaPredicted RBP9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 SYDE2Q5VT97 1194 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 ANGEL2Q5VTE6 544 aaKnown RBP9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 USP17L6PQ6QN14 398 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 SASS6Q6UVJ0 657 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 PDILTQ8N807 584 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 TBCKQ8TEA7 893 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 LRRC15Q8TF66 581 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 SYMPKQ92797 1274 aaKnown RBP9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 MTRQ99707 1265 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 PCDHA5Q9Y5H7 936 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 PCDHA1Q9Y5I3 950 aa9.84□□□□□ -0.83
HMGN1P34-201ENST00000413023 H7C1D1 291 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 hCG_1984214I3L0E3 225 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 MEIS2O14770 477 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 TDP2O95551 362 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 CASP1P29466 404 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 GNA11P29992 359 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 TNNI2P48788 182 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 ADCY7P51828 1080 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 NLRP12P59046 1061 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 ZYXQ15942 572 aaKnown RBP9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 E2F4Q16254 413 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 DPCR1Q3MIW9 517 aa9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 DHX40Q8IX18 779 aaKnown RBP9.83□□□□□ -0.84
HMGN1P34-201ENST00000413023 ELOA2Q8IYF1 753 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms