RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ERCC3P19447 782 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 TECP42680 631 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 ADCY7P51828 1080 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 CYP2W1Q8TAV3 490 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 HOOK2Q96ED9 719 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 CSRNP2Q9H175 543 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 C6orf50Q9HD87 102 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 CSADQ9Y600 493 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 LTBP1Q14766 1721 aa11.1□□□□□ -0.63
SMPD4-203ENST00000412570 MYCLP12524 364 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-203ENST00000412570 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-203ENST00000412570 FBXO11Q86XK2 927 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 PHF20Q9BVI0 1012 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 BLZF1Q9H2G9 400 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 TMEM60Q9H2L4 133 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 FKBP1AP62942 108 aaKnown RBP11.09□□□□□ -0.63
SMPD4-203ENST00000412570 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 PCDHA6Q9UN73 950 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 PCDHA8Q9Y5H6 950 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 KLHL10Q6JEL2 608 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 CDCA5Q96FF9 252 aa11.09□□□□□ -0.63
SMPD4-203ENST00000412570 NOL7Q9UMY1 257 aaKnown RBP11.09□□□□□ -0.63
SMPD4-203ENST00000412570 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
SMPD4-203ENST00000412570 SMCHD1A6NHR9 2005 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 IRF6O14896 467 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 PFKFB1P16118 471 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 PNOCQ13519 176 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 CSPP1Q1MSJ5 1256 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 ASPRV1Q53RT3 343 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 RBSNQ9H1K0 784 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 EHD4Q9H223 541 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 ZHX3Q9H4I2 956 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 BARHL2Q9NY43 387 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 PCDHA4Q9UN74 947 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 ZBTB5O15062 677 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 SKOR2Q2VWA4 1001 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-203ENST00000412570 PRR16Q569H4 304 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 DCAF15Q66K64 600 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 POTEDQ86YR6 584 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 DNAJC25Q9H1X3 360 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 ROBO3Q96MS0 1386 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 GLTPD2A6NH11 291 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 VCAM1P19320 739 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 KARSQ15046 597 aaKnown RBP11.08□□□□□ -0.64
SMPD4-203ENST00000412570 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 TREML2Q5T2D2 321 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 BRAPQ7Z569 592 aa11.08□□□□□ -0.64
SMPD4-203ENST00000412570 TAF1DQ9H5J8 278 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-203ENST00000412570 POTEMA6NI47 508 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 NFIBO00712 420 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 CELF2O95319 508 aaKnown RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 MBD3O95983 291 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 EIF2AK2P19525 551 aaKnown RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 NF2P35240 595 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 STAT3P40763 770 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 SYKP43405 635 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 FAM83AQ86UY5 434 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 APOBEC3FQ8IUX4 373 aaKnown RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 MRPS27Q92552 414 aaKnown RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 VCPKMTQ9H867 229 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 TCP11L1Q9NUJ3 509 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 NYAP2Q9P242 653 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 PTPRAP18433 802 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 CACNB1Q02641 598 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 NPY5RQ15761 445 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 SUPT20HL1Q3ZLR7 823 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 SHC4Q6S5L8 630 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 SMYD4Q8IYR2 804 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 MRIQ9BWK5 157 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 PNMA6FA0A0J9YX94 578 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 USP2O75604 605 aaPredicted RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 CYP2C8P10632 490 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 CYP4A11Q02928 519 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
SMPD4-203ENST00000412570 FBXL16Q8N461 479 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 CCDC148Q8NFR7 591 aa11.07□□□□□ -0.64
SMPD4-203ENST00000412570 SPDYE3A6NKU9 549 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 HTRA3P83110 453 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-203ENST00000412570 LUZP1Q86V48 1076 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 CNNM3Q8NE01 707 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 SYAP1Q96A49 352 aaPredicted RBP11.06□□□□□ -0.64
SMPD4-203ENST00000412570 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 SERTAD1Q9UHV2 236 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 RIPK3Q9Y572 518 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 ECM29Q5VYK3 1845 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 SLC37A4O43826 429 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 GRIN3BO60391 1043 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 ZNF202O95125 648 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 NONOQ15233 471 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMPD4-203ENST00000412570 LONRF3Q496Y0 759 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 MAEAQ7L5Y9 396 aa11.06□□□□□ -0.64
SMPD4-203ENST00000412570 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms