RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 DIXDC1Q155Q3 683 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 ARHGAP31Q2M1Z3 1444 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 FAM212AQ96EL1 285 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 ATP6V0A4Q9HBG4 840 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 STX18Q9P2W9 335 aaKnown RBP8.05□□□□□ -1.12
PTPN3-203ENST00000412145 MX2P20592 715 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 IQCB1Q15051 598 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 NXNQ6DKJ4 435 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 NCAPH2Q6IBW4 605 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 EXOC4Q96A65 974 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 ZBTB18Q99592 522 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 GDPD2Q9HCC8 539 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 ACEP12821 1306 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 TRAPPC8Q9Y2L5 1435 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 VWA3AA6NCI4 1184 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 ALCAMQ13740 583 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 FSCBQ5H9T9 825 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 SIRT1Q96EB6 747 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 MCM9Q9NXL9 1143 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 PRXQ9BXM0 1461 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 KIF23Q02241 960 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-203ENST00000412145 ZCRB1Q8TBF4 217 aaKnown RBP8.05□□□□□ -1.12
PTPN3-203ENST00000412145 HAND2P61296 217 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 DDB1Q16531 1140 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 TTC38Q5R3I4 469 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 MRPL46Q9H2W6 279 aaKnown RBP8.05□□□□□ -1.12
PTPN3-203ENST00000412145 CAV1Q03135 178 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 CALCRLQ16602 461 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTPN3-203ENST00000412145 NECAB1Q8N987 351 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 GSDMAQ96QA5 445 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 EMILIN1Q9Y6C2 1016 aa8.05□□□□□ -1.12
PTPN3-203ENST00000412145 A6NJR5 290 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 KRR1Q13601 381 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 DTX3LQ8TDB6 740 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 DCTPP1Q9H773 170 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 RPRD2Q5VT52 1461 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 RPS6KB1P23443 525 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 POLD1P28340 1107 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 TRIM68Q6AZZ1 485 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 POLR3AO14802 1390 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 LRRC43Q8N309 656 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 RBM17Q96I25 401 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 PBKQ96KB5 322 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ADPGKQ9BRR6 497 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 TM6SF1Q9BZW5 370 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 SLC12A6Q9UHW9 1150 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 PIK3C2GO75747 1445 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 LONP1P36776 959 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 SERPINB4P48594 390 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 LAMC2Q13753 1193 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 MRPL44Q9H9J2 332 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 CHCHD3Q9NX63 227 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 SLC8A2Q9UPR5 921 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 EEF1GP26641 437 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 PABPC4Q13310 644 aaKnown RBP eCLIP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ARHGEF6Q15052 776 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 GLE1Q53GS7 698 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 AKAP4Q5JQC9 854 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ZC3H12CQ9C0D7 883 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 NEUROG2Q9H2A3 272 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ABCA10Q8WWZ4 1543 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ZNF500O60304 480 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 MMEP08473 750 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 TAC1P20366 129 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ATP2B4P23634 1241 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ECE1P42892 770 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 YARSP54577 528 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 CARD6Q9BX69 1037 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 LRWD1Q9UFC0 647 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 STK38LQ9Y2H1 464 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 CCNT1O60563 726 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 TNFAIP1Q13829 316 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 FLOT2Q14254 428 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ELF2Q15723 593 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 ISM2Q6H9L7 571 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 REXO1Q8N1G1 1221 aaKnown RBP8.04□□□□□ -1.12
PTPN3-203ENST00000412145 PI4KAP1Q8N8J0 262 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 BRIP1Q9BX63 1249 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 TMEM60Q9H2L4 133 aa8.04□□□□□ -1.12
PTPN3-203ENST00000412145 PLS1Q14651 629 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 SCYL1Q96KG9 808 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 ATP8A2Q9NTI2 1148 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 NOP53Q9NZM5 478 aaKnown RBP8.03□□□□□ -1.12
PTPN3-203ENST00000412145 SUN2Q9UH99 717 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 ARHGEF12Q9NZN5 1544 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 CHUKO15111 745 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 ZBED4O75132 1171 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 BAG2O95816 211 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 PYGMP11217 842 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 RBM6P78332 1123 aaKnown RBP8.03□□□□□ -1.12
PTPN3-203ENST00000412145 SNX1Q13596 522 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 NELFBQ8WX92 580 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 INTS9Q9NV88 658 aaKnown RBP8.03□□□□□ -1.12
PTPN3-203ENST00000412145 TFCP2L1Q9NZI6 479 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 SUCLA2Q9P2R7 463 aaPredicted RBP8.03□□□□□ -1.12
PTPN3-203ENST00000412145 STOML1Q9UBI4 398 aa8.03□□□□□ -1.12
PTPN3-203ENST00000412145 PAMP19021 973 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms