RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 KLHL28Q9NXS3 571 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 RGL1Q9NZL6 768 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 PLCL2Q9UPR0 1127 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 N4BP1O75113 896 aaKnown RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 MYCNP04198 464 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 PSMC3P17980 439 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 HSP90AA4PQ58FG1 418 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 MSANTD1Q6ZTZ1 278 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 RAPH1Q70E73 1250 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 COLGALT2Q8IYK4 626 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 FAM160A2Q8N612 972 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 PPHLN1Q8NEY8 458 aaKnown RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 FAM161BQ96MY7 647 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 CSRNP1Q96S65 589 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 COMMD9Q9P000 198 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 PLEKHH1Q9ULM0 1364 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 SASH3O75995 380 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 CALM1P0DP23 149 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 CALM2P0DP24 149 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 CALM3P0DP25 149 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 IGHMBP2P38935 993 aaKnown RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 SNCBQ16143 134 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 EXOC3L4Q17RC7 722 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 PDZD4Q76G19 769 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 CFAP61Q8NHU2 1237 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 MRPL48Q96GC5 212 aaKnown RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 OLFM3Q96PB7 478 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 DEPDC7Q96QD5 511 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 ORC3Q9UBD5 711 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 JAK1P23458 1154 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 YWHAQP27348 245 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 NBPF14Q5TI25 921 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC149Q6ZUS6 474 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 OTUD5Q96G74 571 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 HPS5Q9UPZ3 1129 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 FGFR2P21802 821 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 PEX19P40855 299 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 SERPINH1P50454 418 aaKnown RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 NFYCQ13952 458 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 C2CD6Q53TS8 623 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 ESCO1Q5FWF5 840 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 NUP85Q9BW27 656 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 DNAJC25Q9H1X3 360 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 PDZRN3Q9UPQ7 1066 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 AXIN1O15169 862 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 TRPA1O75762 1119 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 ECDO95905 644 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 CASP2P42575 452 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 ARF3P61204 181 aaPredicted RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 ARF1P84077 181 aaKnown RBP5□□□□□ -1.61
PTPN13-202ENST00000411767 PDE1BQ01064 536 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 CDH24Q86UP0 819 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 TBRG4Q969Z0 631 aaKnown RBP eCLIP5□□□□□ -1.61
PTPN13-202ENST00000411767 CABS1Q96KC9 395 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 PPP1R13BQ96KQ4 1090 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 MGAT4AQ9UM21 535 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 GIT1Q9Y2X7 761 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 ARL2BPQ9Y2Y0 163 aa5□□□□□ -1.61
PTPN13-202ENST00000411767 METTL21EPA6NDL7 271 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 DCTN3O75935 186 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 MTTPP55157 894 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 PSMC1P62191 440 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 C6orf10Q5SRN2 563 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 TADA2BQ86TJ2 420 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CDR2LQ86X02 465 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 TAGAPQ8N103 731 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 FSTL5Q8N475 847 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 MYRIPQ8NFW9 859 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SMCR8Q8TEV9 937 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SNF8Q96H20 258 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 THTPAQ9BU02 230 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC177Q9NQR7 707 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 FGFR1OP2Q9NVK5 253 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 KLHL11Q9NVR0 708 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CIZ1Q9ULV3 898 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SCRIBQ14160 1630 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SLC4A2P04920 1241 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CAPN1P07384 714 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 GNAI1P63096 354 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 USHBP1Q8N6Y0 703 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RSPH1Q8WYR4 309 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 VTI1AQ96AJ9 217 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 BRIP1Q9BX63 1249 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 OLA1Q9NTK5 396 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SAC3D1A6NKF1 404 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 EPN2O95208 641 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 S100A6P06703 90 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 APOA4P06727 396 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 POLR2BP30876 1174 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 NEK4P51957 841 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RAD51AP2Q09MP3 1159 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CCDC157Q569K6 752 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 NOP9Q86U38 636 aaKnown RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 CLCC1Q96S66 551 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 NAPGQ99747 312 aaPredicted RBP4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RETREG1Q9H6L5 497 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 ANAPC5Q9UJX4 755 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 RIPOR2Q9Y4F9 1068 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 IQCA1LA6NCM1 817 aa4.99□□□□□ -1.61
PTPN13-202ENST00000411767 SPDYE16A6NNV3 312 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms