RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 RTEL1Q9NZ71 1219 aa20.17■□□□□ 0.82
HCG11-201ENST00000411553 DLATP10515 647 aaKnown RBP20.16■□□□□ 0.82
HCG11-201ENST00000411553 NAA25Q14CX7 972 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 RPS6KA2Q15349 733 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 METTL14Q9HCE5 456 aaKnown RBP20.16■□□□□ 0.82
HCG11-201ENST00000411553 MED23Q9ULK4 1368 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 IFRD2Q12894 506 aaPredicted RBP20.16■□□□□ 0.82
HCG11-201ENST00000411553 MUM1L1Q5H9M0 696 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 KCNQ3O43525 872 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 IGSF3O75054 1194 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 NLGN1Q8N2Q7 840 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 ERBB4Q15303 1308 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 LRRIQ4A6NIV6 560 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 KCNK3O14649 394 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 ADCY8P40145 1251 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
HCG11-201ENST00000411553 EAF2Q96CJ1 260 aaPredicted RBP20.15■□□□□ 0.82
HCG11-201ENST00000411553 NBPF3Q9H094 633 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 ZNF804BA4D1E1 1349 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 RGS16O15492 202 aaPredicted RBP20.15■□□□□ 0.82
HCG11-201ENST00000411553 FOSP01100 380 aaPredicted RBP20.15■□□□□ 0.82
HCG11-201ENST00000411553 PCP11498 1178 aaKnown RBP20.15■□□□□ 0.82
HCG11-201ENST00000411553 PPARDQ03181 441 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 PPP2R5EQ16537 467 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 USPL1Q5W0Q7 1092 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 GTPBP6O43824 516 aaPredicted RBP20.15■□□□□ 0.82
HCG11-201ENST00000411553 POLR2BP30876 1174 aaKnown RBP20.15■□□□□ 0.82
HCG11-201ENST00000411553 ADD1P35611 737 aaKnown RBP20.15■□□□□ 0.82
HCG11-201ENST00000411553 PPP4R1Q8TF05 950 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 SSH2Q76I76 1423 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 MAP3K15Q6ZN16 1313 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 KRIT1O00522 736 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 STX2P32856 288 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 IGBP1P78318 339 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 LRRC24Q50LG9 513 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 RABEP2Q9H5N1 569 aa20.15■□□□□ 0.82
HCG11-201ENST00000411553 PTH1RQ03431 593 aa20.14■□□□□ 0.82
HCG11-201ENST00000411553 ANKRD42Q8N9B4 389 aa20.14■□□□□ 0.82
HCG11-201ENST00000411553 RASSF4Q9H2L5 321 aa20.14■□□□□ 0.82
HCG11-201ENST00000411553 PFDN6O15212 129 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 RNF40O75150 1001 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 TSNAXIP1Q2TAA8 658 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 PPM1KQ8N3J5 372 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 SEPT10Q9P0V9 454 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 TROVE2P10155 538 aaKnown RBP eCLIP20.14■□□□□ 0.81
HCG11-201ENST00000411553 ADAM9Q13443 819 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 TFDP1Q14186 410 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 AOC3Q16853 763 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 PLEKHA4Q9H4M7 779 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 LMBRD1Q9NUN5 540 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 HYOU1Q9Y4L1 999 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 ABCC2Q92887 1545 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 KCTD2Q14681 263 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 TRIML1Q8N9V2 468 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.14■□□□□ 0.81
HCG11-201ENST00000411553 MGARPQ8TDB4 240 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 ANKFY1Q9P2R3 1169 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 BCAP29Q9UHQ4 241 aa20.14■□□□□ 0.81
HCG11-201ENST00000411553 BUB1BO60566 1050 aaPredicted RBP20.13■□□□□ 0.81
HCG11-201ENST00000411553 FGAP02671 866 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 ARHGAP25P42331 645 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 IL17REQ8NFR9 667 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 CCDC127Q96BQ5 260 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 BRD1O95696 1058 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 CTNNA1P35221 906 aaKnown RBP20.13■□□□□ 0.81
HCG11-201ENST00000411553 WHAMMP3Q1A5X7 153 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 C17orf53Q8N3J3 647 aaPredicted RBP20.13■□□□□ 0.81
HCG11-201ENST00000411553 PPP1R12CQ9BZL4 782 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 CTTNBP2Q8WZ74 1663 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 CMA1P23946 247 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 POLR2FP61218 127 aaKnown RBP20.13■□□□□ 0.81
HCG11-201ENST00000411553 USP28Q96RU2 1077 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 XDHP47989 1333 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 SEMA3EO15041 775 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 PPFIA4O75335 1185 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 FAM26FQ5R3K3 315 aa20.13■□□□□ 0.81
HCG11-201ENST00000411553 PPEF1O14829 653 aaPredicted RBP20.12■□□□□ 0.81
HCG11-201ENST00000411553 RPN1P04843 607 aaKnown RBP20.12■□□□□ 0.81
HCG11-201ENST00000411553 LONP1P36776 959 aaKnown RBP20.12■□□□□ 0.81
HCG11-201ENST00000411553 RPS6KC1Q96S38 1066 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 SLC39A2Q9NP94 309 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 RABGAP1Q9Y3P9 1069 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 WDR62O43379 1518 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 NME8Q8N427 588 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 MIPOL1Q8TD10 442 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 TLR3O15455 904 aaKnown RBP20.12■□□□□ 0.81
HCG11-201ENST00000411553 PIK3CAP42336 1068 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 CCNA1P78396 465 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 PHLDB2Q86SQ0 1253 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 ABCC4O15439 1325 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 TTC36A6NLP5 189 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 WDR46O15213 610 aaKnown RBP20.12■□□□□ 0.81
HCG11-201ENST00000411553 UBE3CQ15386 1083 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 PNMA8AQ86V59 439 aaPredicted RBP20.12■□□□□ 0.81
HCG11-201ENST00000411553 CCDC17Q96LX7 622 aa20.12■□□□□ 0.81
HCG11-201ENST00000411553 LOC102724428A0A0B4J2F2 783 aa20.11■□□□□ 0.81
HCG11-201ENST00000411553 GUCY2FP51841 1108 aa20.11■□□□□ 0.81
HCG11-201ENST00000411553 SIK1P57059 783 aa20.11■□□□□ 0.81
HCG11-201ENST00000411553 DPP9Q86TI2 863 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms