RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 ANKRD23Q86SG2 305 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 TSEN2Q8NCE0 465 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ARL8AQ96BM9 186 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 TTYH1Q9H313 450 aaPredicted RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 KANSL2Q9H9L4 492 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ORC3Q9UBD5 711 aaPredicted RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 RIPOR2Q9Y4F9 1068 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 IL16Q14005 1332 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 DNM1LO00429 736 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 MYO1BO43795 1136 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 TLR2O60603 784 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 RAB11FIP3O75154 756 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 GUCY2CP25092 1073 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 APBA1Q02410 837 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 SMC1AQ14683 1233 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 NFE2L2Q16236 605 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ATL3Q6DD88 541 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 PALB2Q86YC2 1186 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 JRKLQ9Y4A0 524 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ABCC12Q96J65 1359 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 CITO14578 2027 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 YDJCA8MPS7 323 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 PAX7P23759 505 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 GUCY1A2P33402 732 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 MCM5P33992 734 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 PTPN12Q05209 780 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 TBC1D8BQ0IIM8 1120 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 MKRN4PQ13434 485 aaPredicted RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 KARSQ15046 597 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 ACCSLQ4AC99 568 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 TAF7LQ5H9L4 462 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 CNPY4Q8N129 248 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 KRT222Q8N1A0 295 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 SHKBP1Q8TBC3 707 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 MFSD14AQ96MC6 490 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 GMLQ99445 158 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 UTP14AQ9BVJ6 771 aaKnown RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 FAM217BQ9NTX9 383 aaPredicted RBP3.61□□□□□ -1.83
RGPD3-202ENST00000409886 RTL9Q8NET4 1388 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 MYH4Q9Y623 1939 aa3.61□□□□□ -1.83
RGPD3-202ENST00000409886 PI4KAP2A4QPH2 592 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 EPHB6O15197 1021 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 FCGRTP55899 365 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 CCDC183Q5T5S1 534 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 CCDC30Q5VVM6 783 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 PI4KAP1Q8N8J0 262 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SSH3Q8TE77 659 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 TIGD1Q96MW7 591 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 MAP7D2Q96T17 732 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 FEZ1Q99689 392 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 OSBPL7Q9BZF2 842 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SAMSN1Q9NSI8 373 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 CLIP2Q9UDT6 1046 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 CCDC39Q9UFE4 941 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 PCDHA7Q9UN72 937 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SMTNL1A8MU46 457 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 PSMD14O00487 310 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 ARHGAP25P42331 645 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 BYSLQ13895 437 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 C1orf53Q5VUE5 145 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 ICE2Q659A1 982 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 NCAPH2Q6IBW4 605 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 RRP36Q96EU6 259 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 INTS4Q96HW7 963 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 JAKMIP1Q96N16 626 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 EYA1Q99502 592 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 BICC1Q9H694 974 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 ZSWIM6Q9HCJ5 1215 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 DBNLQ9UJU6 430 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 RRP15Q9Y3B9 282 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 CENPEQ02224 2701 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SOWAHDA6NJG2 315 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 TLL1O43897 1013 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 POLR3DP05423 398 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 IREB2P48200 963 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 GSCP56915 257 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 LONRF2Q1L5Z9 754 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 RSBN1LQ6PCB5 846 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 C17orf99Q6UX52 265 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 LRP10Q7Z4F1 713 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 HERVK_113Q902F9 699 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SLC10A4Q96EP9 437 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 BOLA2Q9H3K6 86 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 GOLPH3Q9H4A6 298 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 RBM8AQ9Y5S9 174 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 LIG3P49916 1009 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 TIMM10P62072 90 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 MAP3K9P80192 1104 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 RNASELQ05823 741 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 FLIIQ13045 1269 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 CCDC174Q6PII3 467 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SHC4Q6S5L8 630 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SAMD1Q6SPF0 538 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 METTL16Q86W50 562 aaKnown RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 RHPN1Q8TCX5 695 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 MAP4K1Q92918 833 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 SLC24A3Q9HC58 644 aa3.6□□□□□ -1.83
RGPD3-202ENST00000409886 ZMYND8Q9ULU4 1186 aaPredicted RBP3.6□□□□□ -1.83
RGPD3-202ENST00000409886 NR2E1Q9Y466 385 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms