RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GTF2IP78347 998 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 SEMA3FQ13275 785 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 GRIK5Q16478 980 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 FAM47AQ5JRC9 791 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 RESP18Q5W5W9 173 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 HHIPL2Q6UWX4 724 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 CEP57L1Q8IYX8 460 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 NEDD1Q8NHV4 660 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 CBX8Q9HC52 389 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 RRAGDQ9NQL2 400 aaPredicted RBP8.59□□□□□ -1.03
CXCR4-202ENST00000409817 HOOK1Q9UJC3 728 aaKnown RBP8.59□□□□□ -1.03
CXCR4-202ENST00000409817 ZKSCAN5Q9Y2L8 839 aa8.59□□□□□ -1.03
CXCR4-202ENST00000409817 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
CXCR4-202ENST00000409817 C10orf71Q711Q0 1435 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 PLIN4Q96Q06 1357 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 ZBBXA8MT70 800 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 H0YIN7 160 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 WDHD1O75717 1129 aaPredicted RBP8.58□□□□□ -1.04
CXCR4-202ENST00000409817 PLEKHA8P1O95397 391 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 SCG2P13521 617 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 PFKFB1P16118 471 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 RASA1P20936 1047 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 SYKP43405 635 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 HDLBPQ00341 1268 aaKnown RBP8.58□□□□□ -1.04
CXCR4-202ENST00000409817 GRM4Q14833 912 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 PFKFB3Q16875 520 aaPredicted RBP8.58□□□□□ -1.04
CXCR4-202ENST00000409817 GALNT17Q6IS24 598 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.58□□□□□ -1.04
CXCR4-202ENST00000409817 MAPKAPK5Q8IW41 473 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 CNKSR1Q969H4 720 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 CCDC34Q96HJ3 373 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 BPIFA3Q9BQP9 254 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 PRDM9Q9NQV7 894 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 IL17RBQ9NRM6 502 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 FAM13BQ9NYF5 915 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 KCNJ14Q9UNX9 436 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 DAGLAQ9Y4D2 1042 aa8.58□□□□□ -1.04
CXCR4-202ENST00000409817 COL11A2P13942 1736 aaPredicted RBP8.58□□□□□ -1.04
CXCR4-202ENST00000409817 TRIM75PA6NK02 468 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 GOLGA6L19H0YKK7 550 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 PIK3CDO00329 1044 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 DXOO77932 396 aaKnown RBP8.57□□□□□ -1.04
CXCR4-202ENST00000409817 NOVP48745 357 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 CDK8P49336 464 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 TOB1P50616 345 aaPredicted RBP8.57□□□□□ -1.04
CXCR4-202ENST00000409817 PLCD1P51178 756 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 SLC51AQ86UW1 340 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 CMTR1Q8N1G2 835 aaKnown RBP8.57□□□□□ -1.04
CXCR4-202ENST00000409817 SRBD1Q8N5C6 995 aaKnown RBP8.57□□□□□ -1.04
CXCR4-202ENST00000409817 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 STK32BQ9NY57 414 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 SWAP70Q9UH65 585 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 SRPRBQ9Y5M8 271 aaKnown RBP8.57□□□□□ -1.04
CXCR4-202ENST00000409817 MYH1P12882 1939 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 UBE2Q2LH0YL09 131 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 ZNF500O60304 480 aaPredicted RBP8.57□□□□□ -1.04
CXCR4-202ENST00000409817 NMT2O60551 498 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 MARCKSP29966 332 aaPredicted RBP8.57□□□□□ -1.04
CXCR4-202ENST00000409817 SLC15A2Q16348 729 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 SHC4Q6S5L8 630 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 C2CD5Q86YS7 1000 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 CCDC148Q8NFR7 591 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 TEKT1Q969V4 418 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 FERMT2Q96AC1 680 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 DYNLL2Q96FJ2 89 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 DNAJC25Q9H1X3 360 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 VPS54Q9P1Q0 977 aa8.57□□□□□ -1.04
CXCR4-202ENST00000409817 POTEMA6NI47 508 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 BECN2A8MW95 431 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 TOP1P11387 765 aaKnown RBP8.56□□□□□ -1.04
CXCR4-202ENST00000409817 NR5A1Q13285 461 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 IQCB1Q15051 598 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 STRIP1Q5VSL9 837 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 LUZP1Q86V48 1076 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 SUPT20HQ8NEM7 779 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 CCDC12Q8WUD4 166 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-202ENST00000409817 TNFRSF25Q93038 417 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 ZNF622Q969S3 477 aaKnown RBP eCLIP8.56□□□□□ -1.04
CXCR4-202ENST00000409817 TMEM47Q9BQJ4 181 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 PYM1Q9BRP8 204 aaKnown RBP8.56□□□□□ -1.04
CXCR4-202ENST00000409817 SPZ1Q9BXG8 430 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 CABP5Q9NP86 173 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 FBXO2Q9UK22 296 aaPredicted RBP8.56□□□□□ -1.04
CXCR4-202ENST00000409817 KCNH3Q9ULD8 1083 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 TTF2Q9UNY4 1162 aaKnown RBP8.56□□□□□ -1.04
CXCR4-202ENST00000409817 SNED1Q8TER0 1413 aa8.56□□□□□ -1.04
CXCR4-202ENST00000409817 hCG_1984214I3L0E3 225 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 ATP9BO43861 1147 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 CDC25BP30305 580 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 MMP16P51512 607 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 NLRP12P59046 1061 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 NLRP5P59047 1200 aa8.55□□□□□ -1.04
CXCR4-202ENST00000409817 GABPAQ06546 454 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms