RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF532Q9HCE3 1301 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 HSPA1LP34931 641 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 PLA2G4AP47712 749 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 SLC7A5Q01650 507 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 TOB2Q14106 344 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-202ENST00000409031 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 DENND4BO75064 1496 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-202ENST00000409031 IRS4O14654 1257 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-202ENST00000409031 HLA-DOAP06340 250 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 BIRC2Q13490 618 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 ZNF658Q5TYW1 1059 aaPredicted RBP19.41■□□□□ 0.7
SMPD4-202ENST00000409031 MYOCDQ8IZQ8 938 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 BATF3Q9NR55 127 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 TMOD2Q9NZR1 351 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 BZW2Q9Y6E2 419 aaKnown RBP19.41■□□□□ 0.7
SMPD4-202ENST00000409031 GMNCA6NCL1 334 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 CXCR5P32302 372 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 POLA2Q14181 598 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 LGSNQ5TDP6 509 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 APOA5Q6Q788 366 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 IMPG2Q9BZV3 1241 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 Q9H521 79 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 NFU1Q9UMS0 254 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 DAAM1Q9Y4D1 1078 aa19.41■□□□□ 0.7
SMPD4-202ENST00000409031 DBN1Q16643 649 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 FBXO41Q8TF61 875 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 DCAF5Q96JK2 942 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 NCKAP5LQ9HCH0 1330 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 CFAP61Q8NHU2 1237 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 PBKQ96KB5 322 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 ATP8A1Q9Y2Q0 1164 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 BCRP11274 1271 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 POLR2FP61218 127 aaKnown RBP19.4■□□□□ 0.7
SMPD4-202ENST00000409031 SMYD4Q8IYR2 804 aaPredicted RBP19.4■□□□□ 0.7
SMPD4-202ENST00000409031 UHMK1Q8TAS1 419 aaKnown RBP19.4■□□□□ 0.7
SMPD4-202ENST00000409031 ZNF594Q96JF6 807 aaPredicted RBP19.4■□□□□ 0.7
SMPD4-202ENST00000409031 ABCC10Q5T3U5 1492 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 ARHGAP31Q2M1Z3 1444 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 SPDYE3A6NKU9 549 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 SLC20A2Q08357 652 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 SPDL1Q96EA4 605 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 DBNLQ9UJU6 430 aaKnown RBP19.4■□□□□ 0.7
SMPD4-202ENST00000409031 CD2APQ9Y5K6 639 aa19.4■□□□□ 0.7
SMPD4-202ENST00000409031 COG7P83436 770 aa19.39■□□□□ 0.7
SMPD4-202ENST00000409031 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.7
SMPD4-202ENST00000409031 HNRNPLLQ8WVV9 542 aaKnown RBP19.39■□□□□ 0.7
SMPD4-202ENST00000409031 PPP1R9AQ9ULJ8 1098 aa19.39■□□□□ 0.7
SMPD4-202ENST00000409031 RPAP1Q9BWH6 1393 aaPredicted RBP19.39■□□□□ 0.69
SMPD4-202ENST00000409031 TRPM2O94759 1503 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 BAG2O95816 211 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 CAPRIN2Q6IMN6 1127 aaKnown RBP19.39■□□□□ 0.69
SMPD4-202ENST00000409031 NLRP14Q86W24 1093 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 CUEDC2Q9H467 287 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 SRPRBQ9Y5M8 271 aaKnown RBP19.39■□□□□ 0.69
SMPD4-202ENST00000409031 PPFIA2O75334 1257 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 TBC1D8O95759 1140 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 PSMC4P43686 418 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 TRAPPC10P48553 1259 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 TEX11Q8IYF3 940 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 GRAMD1CQ8IYS0 662 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 LRRC8CQ8TDW0 803 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 RABGAP1Q9Y3P9 1069 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 FHOD1Q9Y613 1164 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 CPSF1Q10570 1443 aaKnown RBP19.39■□□□□ 0.69
SMPD4-202ENST00000409031 KRT31Q15323 416 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 NELFCDQ8IXH7 590 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 ABHD10Q9NUJ1 306 aa19.39■□□□□ 0.69
SMPD4-202ENST00000409031 hCG_1642624A0A1W2PR95 340 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 THAP12O43422 761 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 MOCS3O95396 460 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 RESP18Q5W5W9 173 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 IL17REQ8NFR9 667 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 REREQ9P2R6 1566 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 RFC1P35251 1148 aaPredicted RBP19.38■□□□□ 0.69
SMPD4-202ENST00000409031 CYP27A1Q02318 531 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 FBXW10Q5XX13 1052 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 ARHGEF18Q6ZSZ5 1173 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 TRMT1LQ7Z2T5 733 aaKnown RBP19.38■□□□□ 0.69
SMPD4-202ENST00000409031 ALDH8A1Q9H2A2 487 aaPredicted RBP19.38■□□□□ 0.69
SMPD4-202ENST00000409031 AATKQ6ZMQ8 1374 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 PASKQ96RG2 1323 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 MYL1P05976 194 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 NEK9Q8TD19 979 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 GRK7Q8WTQ7 553 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 HVCN1Q96D96 273 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 VPS37BQ9H9H4 285 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 PLAAQ9Y263 795 aa19.38■□□□□ 0.69
SMPD4-202ENST00000409031 XRCC5P13010 732 aaKnown RBP19.37■□□□□ 0.69
SMPD4-202ENST00000409031 PRDM1O75626 825 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 TRIM37O94972 964 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 MYO1EQ12965 1108 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 KRT28Q7Z3Y7 464 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 LZTS2Q9BRK4 669 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 YIPF3Q9GZM5 350 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 FAF1Q9UNN5 650 aaPredicted RBP19.37■□□□□ 0.69
SMPD4-202ENST00000409031 MED23Q9ULK4 1368 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 BLIDQ8IZY5 108 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 SPZ1Q9BXG8 430 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 NUF2Q9BZD4 464 aa19.37■□□□□ 0.69
SMPD4-202ENST00000409031 THAP9Q9H5L6 903 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms