RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 RRP1BQ14684 758 aaKnown RBP11.21□□□□□ -0.61
POLR1A-202ENST00000409024 CCDC73Q6ZRK6 1079 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 KRT25Q7Z3Z0 450 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 HEATR3Q7Z4Q2 680 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 FAM160B2Q86V87 743 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 ADGRF4Q8IZF3 695 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 ZC3H15Q8WU90 426 aaKnown RBP11.21□□□□□ -0.61
POLR1A-202ENST00000409024 CHURC1Q8WUH1 139 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 LPAR1Q92633 364 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 FERMT2Q96AC1 680 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 SHISA4Q96DD7 197 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 PIGSQ96S52 555 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 UBA5Q9GZZ9 404 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 VCPKMTQ9H867 229 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 SAGE1Q9NXZ1 904 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 PCDHA7Q9UN72 937 aa11.21□□□□□ -0.61
POLR1A-202ENST00000409024 FRMPD2Q68DX3 1309 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 hCG_1642624A0A1W2PR95 340 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 GOLGA6L3A6NEY3 463 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 SMCO2A6NFE2 343 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 LAD1O00515 517 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 EGFRP00533 1210 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 TOB1P50616 345 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 CEBPZQ03701 1054 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 FAM160A1Q05DH4 1040 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 NR5A1Q13285 461 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 ANGEL2Q5VTE6 544 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 ARL6IP4Q66PJ3 421 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 CCAR1Q8IX12 1150 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 ELOA2Q8IYF1 753 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 KRI1Q8N9T8 703 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 MRPS27Q92552 414 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 WDR18Q9BV38 432 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 KIAA1683Q9H0B3 1180 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 AS3MTQ9HBK9 375 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
POLR1A-202ENST00000409024 SRPRBQ9Y5M8 271 aaKnown RBP11.2□□□□□ -0.62
POLR1A-202ENST00000409024 CCDC194A0A1B0GVG4 234 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 FDX1P10109 184 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 PTPREP23469 700 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 MRE11P49959 708 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 STAT2P52630 851 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 USP14P54578 494 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 JAG1P78504 1218 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 TTC38Q5R3I4 469 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
POLR1A-202ENST00000409024 AXDND1Q5T1B0 1012 aaPredicted RBP11.19□□□□□ -0.62
POLR1A-202ENST00000409024 SYDE2Q5VT97 1194 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 RBM43Q6ZSC3 357 aaKnown RBP11.19□□□□□ -0.62
POLR1A-202ENST00000409024 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
POLR1A-202ENST00000409024 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 ENGASEQ8NFI3 743 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 TIGD1Q96MW7 591 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 NAP1L4Q99733 375 aaKnown RBP11.19□□□□□ -0.62
POLR1A-202ENST00000409024 PYM1Q9BRP8 204 aaKnown RBP11.19□□□□□ -0.62
POLR1A-202ENST00000409024 NUP62CLQ9H1M0 184 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 CLSTN2Q9H4D0 955 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 VAT1LQ9HCJ6 419 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
POLR1A-202ENST00000409024 A0A1W2PRG0 241 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
POLR1A-202ENST00000409024 TRPA1O75762 1119 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 SLURP2P0DP57 97 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 LIG1P18858 919 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 ADCY7P51828 1080 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 HIRAP54198 1017 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-202ENST00000409024 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
POLR1A-202ENST00000409024 TTBK2Q6IQ55 1244 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 KCTD1Q719H9 257 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 HOMER1Q86YM7 354 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 GPKOWQ92917 476 aaPredicted RBP eCLIP11.18□□□□□ -0.62
POLR1A-202ENST00000409024 DCPSQ96C86 337 aaKnown RBP11.18□□□□□ -0.62
POLR1A-202ENST00000409024 AMNQ9BXJ7 453 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
POLR1A-202ENST00000409024 FTOQ9C0B1 505 aaKnown RBP eCLIP11.18□□□□□ -0.62
POLR1A-202ENST00000409024 ZNF408Q9H9D4 720 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 DACT1Q9NYF0 836 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 GGA3Q9NZ52 723 aa11.18□□□□□ -0.62
POLR1A-202ENST00000409024 C19orf81C9J6K1 198 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 USP17L10C9JJH3 530 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 TMEM232C9JQI7 657 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
POLR1A-202ENST00000409024 CAVIN2O95810 425 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 HUNKP57058 714 aa11.17□□□□□ -0.62
POLR1A-202ENST00000409024 ATP2C1P98194 919 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms