RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 PSMC4P43686 418 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 METAP2P50579 478 aaKnown RBP eCLIP19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 OAZ1P54368 228 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 CCT2P78371 535 aaKnown RBP19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 CCNA1P78396 465 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 ANKRD1Q15327 319 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 TMTC3Q6ZXV5 915 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 NOL8Q76FK4 1167 aaKnown RBP19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 MTMR8Q96EF0 704 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 ERO1AQ96HE7 468 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 AGBL1Q96MI9 1066 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 RBM28Q9NW13 759 aaKnown RBP19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 RIPK3Q9Y572 518 aa19.53■□□□□ 0.72
HMGA1P7-201ENST00000406908 TAL1P17542 331 aaPredicted RBP19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 SMARCA1P28370 1054 aa19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 SLC4A3P48751 1232 aa19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 CDC37Q16543 378 aaPredicted RBP19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 SNRNP48Q6IEG0 339 aaKnown RBP19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 RIOX2Q8IUF8 465 aa19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 CCDC82Q8N4S0 544 aa19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 TRIM47Q96LD4 638 aa19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 LZTS2Q9BRK4 669 aa19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 TEX13BQ9BXU2 312 aa19.52■□□□□ 0.72
HMGA1P7-201ENST00000406908 ERCC3P19447 782 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 FUT2Q10981 343 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 STK3Q13188 491 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 KIF22Q14807 665 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 PPP2R5BQ15173 497 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 QRICH1Q2TAL8 776 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 SHCBP1Q8NEM2 672 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 PIGSQ96S52 555 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 SPZ1Q9BXG8 430 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 NCOA5Q9HCD5 579 aaKnown RBP19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 NID2Q14112 1375 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 SMCHD1A6NHR9 2005 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 DOCK3Q8IZD9 2030 aa19.51■□□□□ 0.71
HMGA1P7-201ENST00000406908 LARGE1O95461 756 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 FMNL1O95466 1100 aaPredicted RBP19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 SLC25A27O95847 323 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 ICAM1P05362 532 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 FCGRTP55899 365 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 ME3Q16798 604 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 NCAPG2Q86XI2 1143 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 HOMER1Q86YM7 354 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 CCAR1Q8IX12 1150 aaKnown RBP19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 PIBF1Q8WXW3 757 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 PRDM10Q9NQV6 1147 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 ZSWIM8A7E2V4 1837 aa19.5■□□□□ 0.71
HMGA1P7-201ENST00000406908 CCDC196A0A1B0GTZ2 297 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 TNPO2O14787 897 aaKnown RBP19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 PFKFB2O60825 505 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 ALAS1P13196 640 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 MAPK4P31152 587 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 NTRK3Q16288 839 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 WDR78Q5VTH9 848 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 SLKQ9H2G2 1235 aaPredicted RBP19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 MROH8Q9H579 483 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 CCPG1Q9ULG6 757 aa19.49■□□□□ 0.71
HMGA1P7-201ENST00000406908 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 ZBTB5O15062 677 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 PPP1R11O60927 126 aaPredicted RBP19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 SCRN1Q12765 414 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 GPR142Q7Z601 462 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 PLEKHH3Q7Z736 793 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 GJD2Q9UKL4 321 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 LIMCH1Q9UPQ0 1083 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 CNTNAP5Q8WYK1 1306 aa19.48■□□□□ 0.71
HMGA1P7-201ENST00000406908 PNMA6FA0A0J9YX94 578 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 CD2BP2O95400 341 aaKnown RBP19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 PTPREP23469 700 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 COPB2P35606 906 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 TKFCQ3LXA3 575 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 OTOP1Q7RTM1 612 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 FBXO11Q86XK2 927 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 NECAB1Q8N987 351 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 RRP36Q96EU6 259 aaKnown RBP19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 TRERF1Q96PN7 1200 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 RNF146Q9NTX7 359 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 TRIM17Q9Y577 477 aa19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 V9GY48 417 aaPredicted RBP19.47■□□□□ 0.71
HMGA1P7-201ENST00000406908 MGAMO43451 1857 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 ST18O60284 1047 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 PPFIA3O75145 1194 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 ARHGEF6Q15052 776 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 USH1GQ495M9 461 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 MUM1L1Q5H9M0 696 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 CHST13Q8NET6 341 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 IL27Q8NEV9 243 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 COA7Q96BR5 231 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 AMNQ9BXJ7 453 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 CWC22Q9HCG8 908 aaKnown RBP19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 PNMA2Q9UL42 364 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 GABRQQ9UN88 632 aa19.46■□□□□ 0.71
HMGA1P7-201ENST00000406908 GNRH1P01148 92 aa19.45■□□□□ 0.7
HMGA1P7-201ENST00000406908 IFNAR1P17181 557 aa19.45■□□□□ 0.7
HMGA1P7-201ENST00000406908 CLEC4DQ8WXI8 215 aa19.45■□□□□ 0.7
HMGA1P7-201ENST00000406908 SRRDQ9UH36 339 aa19.45■□□□□ 0.7
HMGA1P7-201ENST00000406908 SLC15A5A6NIM6 579 aa19.44■□□□□ 0.7
HMGA1P7-201ENST00000406908 STRNO43815 780 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms