RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 NMRK2Q9NPI5 230 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 GINM1Q9NU53 330 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 RTEL1Q9NZ71 1219 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 SYNPO2Q9UMS6 1093 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 PCDHB6Q9Y5E3 794 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 PCNTO95613 3336 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 SPTLC2O15270 562 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 MBD3O95983 291 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 VCAM1P19320 739 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 TOB1P50616 345 aaPredicted RBP4.25□□□□□ -1.73
RTN4-208ENST00000404909 ADCY7P51828 1080 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 USP14P54578 494 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 ZNF174Q15697 407 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 ATL3Q6DD88 541 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 FBXO11Q86XK2 927 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 REXO1Q8N1G1 1221 aaKnown RBP4.25□□□□□ -1.73
RTN4-208ENST00000404909 LINC00301Q8NCQ3 95 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 RGS22Q8NE09 1264 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 LPAR1Q92633 364 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 OTUD5Q96G74 571 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 PGBD1Q96JS3 809 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 ZMYND12Q9H0C1 365 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 RPAP3Q9H6T3 665 aaPredicted RBP4.25□□□□□ -1.73
RTN4-208ENST00000404909 PSTPIP2Q9H939 334 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 EMILIN3Q9NT22 766 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 POLR3EQ9NVU0 708 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 RCOR1Q9UKL0 485 aa4.25□□□□□ -1.73
RTN4-208ENST00000404909 NOL7Q9UMY1 257 aaKnown RBP4.25□□□□□ -1.73
RTN4-208ENST00000404909 UBE2SQ16763 222 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 INF2Q27J81 1249 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 CPXCR1Q8N123 301 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 KCNG4Q8TDN1 519 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 AMNQ9BXJ7 453 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 TMEM260Q9NX78 707 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 FEM1BQ9UK73 627 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 PCDHA6Q9UN73 950 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 CTDP1Q9Y5B0 961 aaPredicted RBP4.24□□□□□ -1.73
RTN4-208ENST00000404909 PCDHA8Q9Y5H6 950 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 SNCAIPQ9Y6H5 919 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 ELP1O95163 1332 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L15C9J2P7 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L13C9JLJ4 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L11C9JVI0 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L18D6R9N7 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L22D6RA61 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L17D6RBQ6 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L19D6RCP7 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L20D6RJB6 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 hCG_1984214I3L0E3 225 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 WNT7AO00755 349 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 WDR46O15213 610 aaKnown RBP4.24□□□□□ -1.73
RTN4-208ENST00000404909 MCM7P33993 719 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 NASPP49321 788 aaPredicted RBP4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L24Q0WX57 530 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 SLC39A14Q15043 492 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 GALNT17Q6IS24 598 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 USP17L6PQ6QN14 398 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 BTNL9Q6UXG8 535 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 ARMC9Q7Z3E5 817 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 ZNF713Q8N859 430 aaPredicted RBP4.24□□□□□ -1.73
RTN4-208ENST00000404909 CUL5Q93034 780 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 TNFRSF25Q93038 417 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 MTMR8Q96EF0 704 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 SLF1Q9BQI6 1058 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 WDR18Q9BV38 432 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 TMOD4Q9NZQ9 345 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 PCDHA7Q9UN72 937 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 IRF6O14896 467 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 YEATS4O95619 227 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 MRPL12P52815 198 aaKnown RBP4.24□□□□□ -1.73
RTN4-208ENST00000404909 LETM2Q2VYF4 491 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 TTC38Q5R3I4 469 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 FAM160B2Q86V87 743 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 CCAR1Q8IX12 1150 aaKnown RBP4.24□□□□□ -1.73
RTN4-208ENST00000404909 ANKRD13AQ8IZ07 590 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 PRPF38AQ8NAV1 312 aaKnown RBP4.24□□□□□ -1.73
RTN4-208ENST00000404909 CLIC6Q96NY7 704 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 HOMER2Q9NSB8 354 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 AFG3L2Q9Y4W6 797 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 MRVI1Q9Y6F6 885 aa4.24□□□□□ -1.73
RTN4-208ENST00000404909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 A0A1B0GVL5 298 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 LIG1P18858 919 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 HOXA13P31271 388 aaPredicted RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 MKRN3Q13064 507 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 NONOQ15233 471 aaKnown RBP eCLIP4.23□□□□□ -1.738e-7■■□□□ 13.4
RTN4-208ENST00000404909 SPECC1Q5M775 1068 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 NOL9Q5SY16 702 aaKnown RBP4.23□□□□□ -1.73
RTN4-208ENST00000404909 GADL1Q6ZQY3 521 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 KRT25Q7Z3Z0 450 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 JMYQ8N9B5 988 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 FSIP1Q8NA03 581 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 DAGLBQ8NCG7 672 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 TBCKQ8TEA7 893 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 AGBL1Q96MI9 1066 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 RIC8AQ9NPQ8 531 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 TMEM63CQ9P1W3 806 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 CEP131Q9UPN4 1083 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 ESYT2A0FGR8 921 aa4.23□□□□□ -1.73
RTN4-208ENST00000404909 C19orf81C9J6K1 198 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms