RNA–Protein interactions for RNA: ENST00000403562.5

PRKAR1B-203, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1B, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-203ENST00000403562 NFE2L3Q9Y4A8 694 aa27.79■■■□□ 2.04
PRKAR1B-203ENST00000403562 PCDHAC2Q9Y5I4 1007 aa27.79■■■□□ 2.04
PRKAR1B-203ENST00000403562 SHTN1A0MZ66 631 aa27.79■■■□□ 2.04
PRKAR1B-203ENST00000403562 GMPSP49915 693 aaPredicted RBP27.79■■■□□ 2.04
PRKAR1B-203ENST00000403562 GABPAQ06546 454 aa27.79■■■□□ 2.04
PRKAR1B-203ENST00000403562 ARMCX5Q6P1M9 558 aa27.79■■■□□ 2.04
PRKAR1B-203ENST00000403562 GOLGA8HP0CJ92 632 aa27.78■■■□□ 2.04
PRKAR1B-203ENST00000403562 ZNF18P17022 549 aa27.78■■■□□ 2.04
PRKAR1B-203ENST00000403562 TXLNAP40222 546 aa27.78■■■□□ 2.04
PRKAR1B-203ENST00000403562 FMR1Q06787 632 aaKnown RBP eCLIP27.78■■■□□ 2.045e-66■■■■■ 115.8
PRKAR1B-203ENST00000403562 GPC2Q8N158 579 aa27.78■■■□□ 2.04
PRKAR1B-203ENST00000403562 DPF2Q92785 391 aa27.78■■■□□ 2.04
PRKAR1B-203ENST00000403562 ZMYND12Q9H0C1 365 aa27.78■■■□□ 2.04
PRKAR1B-203ENST00000403562 CRKP46108 304 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 IL17AQ16552 155 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 VSTM4Q8IW00 320 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 RRP36Q96EU6 259 aaKnown RBP27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 LAD1O00515 517 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 TNNT1P13805 278 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 RPS12P25398 132 aaKnown RBP27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 HHIPL2Q6UWX4 724 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 RASGRP4Q8TDF6 673 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 TEKT1Q969V4 418 aa27.77■■■□□ 2.04
PRKAR1B-203ENST00000403562 DDNO94850 711 aaPredicted RBP27.76■■■□□ 2.03
PRKAR1B-203ENST00000403562 PICALMQ13492 652 aa27.76■■■□□ 2.03
PRKAR1B-203ENST00000403562 MRIQ9BWK5 157 aa27.76■■■□□ 2.03
PRKAR1B-203ENST00000403562 SEC63Q9UGP8 760 aaKnown RBP27.76■■■□□ 2.03
PRKAR1B-203ENST00000403562 SWAP70Q9UH65 585 aa27.76■■■□□ 2.03
PRKAR1B-203ENST00000403562 NAPAP54920 295 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 HDLBPQ00341 1268 aaKnown RBP27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 PDXDC2PQ6P474 469 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 SERPINA10Q9UK55 444 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 hCG_1984214I3L0E3 225 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 GNA11P29992 359 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 USP17L2Q6R6M4 530 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 KRT25Q7Z3Z0 450 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 CCAR2Q8N163 923 aaKnown RBP27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 ZNF713Q8N859 430 aaPredicted RBP27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 CCDC112Q8NEF3 446 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 C6orf50Q9HD87 102 aa27.75■■■□□ 2.03
PRKAR1B-203ENST00000403562 APOBEC3HQ6NTF7 200 aaKnown RBP27.74■■■□□ 2.03
PRKAR1B-203ENST00000403562 OGFOD1Q8N543 542 aa27.74■■■□□ 2.03
PRKAR1B-203ENST00000403562 ZDHHC15Q96MV8 337 aa27.74■■■□□ 2.03
PRKAR1B-203ENST00000403562 MTMR4Q9NYA4 1195 aa27.74■■■□□ 2.03
PRKAR1B-203ENST00000403562 GTPBP6O43824 516 aaPredicted RBP27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 CDK11BP21127 795 aaKnown RBP27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 PRPHP41219 470 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 INF2Q27J81 1249 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 DTHD1Q6ZMT9 781 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 RASGRP2Q7LDG7 609 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 TRMT44Q8IYL2 757 aaKnown RBP27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 PAXBP1Q9Y5B6 917 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 ZC3H4Q9UPT8 1303 aaKnown RBP27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 IGKV6D-41A0A0C4DH26 115 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 ASPRV1Q53RT3 343 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 NYAP1Q6ZVC0 841 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 MICALL2Q8IY33 904 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 DDX4Q9NQI0 724 aaKnown RBP27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 USP40Q9NVE5 1235 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 SERPINB13Q9UIV8 391 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 HDAC9Q9UKV0 1011 aa27.73■■■□□ 2.03
PRKAR1B-203ENST00000403562 SYNRGQ9UMZ2 1314 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 ESYT2A0FGR8 921 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 DCAF8L1A6NGE4 600 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 PDHBP11177 359 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 RBM5P52756 815 aaKnown RBP eCLIP27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 ZNF280AP59817 542 aaPredicted RBP27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 CUL4BQ13620 913 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 MED15Q96RN5 788 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 RIOX1Q9H6W3 641 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 CNOT7Q9UIV1 285 aaKnown RBP27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 SIPA1L1O43166 1804 aa27.72■■■□□ 2.03
PRKAR1B-203ENST00000403562 USP27XA6NNY8 438 aa27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 RRP9O43818 475 aaKnown RBP27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 SPATA1Q5VX52 437 aa27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 INTS13Q9NVM9 706 aa27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 RIOK3O14730 519 aaKnown RBP27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 EGFRP00533 1210 aa27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 NONOQ15233 471 aaKnown RBP eCLIP27.71■■■□□ 2.031e-6■■■■□ 20.7
PRKAR1B-203ENST00000403562 PTPN14Q15678 1187 aa27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 HOMER1Q86YM7 354 aa27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 CPVLQ9H3G5 476 aa27.71■■■□□ 2.03
PRKAR1B-203ENST00000403562 SMCO2A6NFE2 343 aa27.7■■■□□ 2.02
PRKAR1B-203ENST00000403562 USP17L5A8MUK1 530 aa27.7■■■□□ 2.02
PRKAR1B-203ENST00000403562 KIF2AO00139 706 aaPredicted RBP27.7■■■□□ 2.02
PRKAR1B-203ENST00000403562 CASP1P29466 404 aa27.7■■■□□ 2.02
PRKAR1B-203ENST00000403562 PRMT6Q96LA8 375 aaPredicted RBP27.7■■■□□ 2.02
PRKAR1B-203ENST00000403562 RMND1Q9NWS8 449 aa27.7■■■□□ 2.02
PRKAR1B-203ENST00000403562 GPRC5DQ9NZD1 345 aa27.7■■■□□ 2.02
PRKAR1B-203ENST00000403562 TMEM232C9JQI7 657 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 SNHG28P0DPA3 235 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 AKR1B1P15121 316 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 STAT6P42226 847 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 ORC2Q13416 577 aaPredicted RBP27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 CEP135Q66GS9 1140 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 PIGSQ96S52 555 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 MYOZ2Q9NPC6 264 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 DISC1Q9NRI5 854 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 HLA-DOAP06340 250 aa27.69■■■□□ 2.02
PRKAR1B-203ENST00000403562 CD44P16070 742 aaKnown RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms