RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 FKBP1BP68106 108 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 LRP10Q7Z4F1 713 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 CTU1Q7Z7A3 348 aaKnown RBP8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 RGS22Q8NE09 1264 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 PLBD2Q8NHP8 589 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 EPS8L3Q8TE67 593 aaKnown RBP8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 ZKSCAN3Q9BRR0 538 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 RNF186Q9NXI6 227 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 GGA3Q9NZ52 723 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 LAMB4A4D0S4 1761 aa8.71□□□□□ -1.02
CEACAM1-208ENST00000403461 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 SHTN1A0MZ66 631 aa8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 FAM155AB1AL88 458 aaPredicted RBP8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 HOXB7P09629 217 aa8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 AFF1P51825 1210 aaKnown RBP8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 SOX10P56693 466 aa8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 SF3B3Q15393 1217 aaKnown RBP8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 CEP135Q66GS9 1140 aa8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 C8orf86Q6ZUL3 223 aa8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 TMEM102Q8N9M5 508 aaPredicted RBP8.7□□□□□ -1.02
CEACAM1-208ENST00000403461 KRBA1A5PL33 1030 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 PDE2AO00408 941 aaPredicted RBP8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 GPSM2P81274 684 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 GRIK5Q16478 980 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 PKN2Q16513 984 aaKnown RBP8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 CACTIN-AS1Q8N1I8 211 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 CELF1Q92879 486 aaKnown RBP8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 NXPE3Q969Y0 559 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 CDCA5Q96FF9 252 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 FAM89AQ96GI7 184 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 POP1Q99575 1024 aaKnown RBP8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 DBF4Q9UBU7 674 aaPredicted RBP8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 POLLQ9UGP5 575 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 HDAC9Q9UKV0 1011 aa8.69□□□□□ -1.02
CEACAM1-208ENST00000403461 K7ELQ4 463 aaPredicted RBP8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 IRS4O14654 1257 aaPredicted RBP8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 GADD45BO75293 160 aaPredicted RBP8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 UFL1O94874 794 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 RPS8P62241 208 aaKnown RBP8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 ANGEL2Q5VTE6 544 aaKnown RBP8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 PI16Q6UXB8 463 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 LINC00114Q6XXX2 140 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 AGBL3Q8NEM8 1001 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 TBC1D16Q8TBP0 767 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 BHLHE41Q9C0J9 482 aaPredicted RBP8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 EHD4Q9H223 541 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 SUV39H2Q9H5I1 410 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 LIN7BQ9HAP6 207 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 HYPKQ9NX55 129 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 CHPF2Q9P2E5 772 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 LAS1LQ9Y4W2 734 aaKnown RBP8.68□□□□□ -1.02
CEACAM1-208ENST00000403461 CHL1O00533 1208 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 VIL1P09327 827 aaKnown RBP8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 NF2P35240 595 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 TMPOP42166 694 aaKnown RBP8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 COL9A3Q14050 684 aaPredicted RBP8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 CCDC152Q4G0S7 254 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 XP32Q5T750 250 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 GDF6Q6KF10 455 aaPredicted RBP8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 DLK2Q6UY11 383 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 RASAL3Q86YV0 1011 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 CCNJLQ8IV13 435 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 RTL9Q8NET4 1388 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 FRMD6Q96NE9 622 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 HHIPQ96QV1 700 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 TCF12Q99081 682 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 ISCA1Q9BUE6 129 aa8.67□□□□□ -1.02
CEACAM1-208ENST00000403461 PITPNM2Q9BZ72 1349 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 PIK3R2O00459 728 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 GIPC1O14908 333 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 NID1P14543 1247 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 PTPRAP18433 802 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 COL8A1P27658 744 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 ZNF280AP59817 542 aaPredicted RBP8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 SREBF2Q12772 1141 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 TRIM28Q13263 835 aaKnown RBP8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 RALBP1Q15311 655 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 ALYREFQ86V81 257 aaKnown RBP8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 ZBTB38Q8NAP3 1195 aaPredicted RBP8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 GIPC2Q8TF65 315 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 ZNF428Q96B54 188 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 DUSP9Q99956 384 aaKnown RBP8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 CHMP4AQ9BY43 222 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 ADAM19Q9H013 955 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 MYOZ2Q9NPC6 264 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 KDM3BQ7LBC6 1761 aa8.66□□□□□ -1.02
CEACAM1-208ENST00000403461 XDHP47989 1333 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 GNB5O14775 395 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 GRM2Q14416 872 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 WDR43Q15061 677 aaKnown RBP eCLIP8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 ANKRD18AQ8IVF6 992 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 IL22RA1Q8N6P7 574 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 GCC1Q96CN9 775 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 CDC5LQ99459 802 aaKnown RBP8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 BCO2Q9BYV7 579 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.02
CEACAM1-208ENST00000403461 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms