RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 ABHD16BQ9H3Z7 469 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 RAVER2Q9HCJ3 691 aaKnown RBP14.69□□□□□ -0.06
PRAME-204ENST00000403441 EPB41L4AQ9HCS5 686 aaPredicted RBP14.69□□□□□ -0.06
PRAME-204ENST00000403441 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.69□□□□□ -0.06
PRAME-204ENST00000403441 MTMR4Q9NYA4 1195 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 VCANP13611 3396 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 ELP1O95163 1332 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 TTC41PQ6P2S7 1318 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 PRDM1O75626 825 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 TIMP1P01033 207 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 SLC3A2P08195 630 aaKnown RBP14.68□□□□□ -0.06
PRAME-204ENST00000403441 CCDC144BQ3MJ40 725 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 LRRC47Q8N1G4 583 aaKnown RBP14.68□□□□□ -0.06
PRAME-204ENST00000403441 MKL1Q969V6 931 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 VTI1AQ96AJ9 217 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 PLIN4Q96Q06 1357 aa14.68□□□□□ -0.06
PRAME-204ENST00000403441 A0A0U1RQG5 324 aaPredicted RBP14.67□□□□□ -0.06
PRAME-204ENST00000403441 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.67□□□□□ -0.06
PRAME-204ENST00000403441 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.67□□□□□ -0.06
PRAME-204ENST00000403441 MYADML2A6NDP7 307 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 ASGR1P07306 291 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 TSPY3P0CV98 308 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 TSPY8P0CW00 308 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 FDX1P10109 184 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 DNAJB2P25686 324 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 PDE4BQ07343 736 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 IKQ13123 557 aaPredicted RBP14.67□□□□□ -0.06
PRAME-204ENST00000403441 PPIGQ13427 754 aaKnown RBP eCLIP14.67□□□□□ -0.06
PRAME-204ENST00000403441 TSHZ3Q63HK5 1081 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 CCSAPQ6IQ19 270 aaPredicted RBP14.67□□□□□ -0.06
PRAME-204ENST00000403441 ARMCX2Q7L311 632 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 PI4K2BQ8TCG2 481 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 UPF3AQ9H1J1 476 aaKnown RBP14.67□□□□□ -0.06
PRAME-204ENST00000403441 HOMER2Q9NSB8 354 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 TBX21Q9UL17 535 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 PRUNE2Q8WUY3 3088 aa14.67□□□□□ -0.06
PRAME-204ENST00000403441 PATL2C9JE40 543 aaKnown RBP14.66□□□□□ -0.06
PRAME-204ENST00000403441 M0R2C6 588 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 TLR3O15455 904 aaKnown RBP14.66□□□□□ -0.06
PRAME-204ENST00000403441 BMP3P12645 472 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 STAT2P52630 851 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 GJA9P57773 515 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 GNASQ5JWF2 1037 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 PPP4R3BQ5MIZ7 849 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 SLFN13Q68D06 897 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 ACAD9Q9H845 621 aa14.66□□□□□ -0.06
PRAME-204ENST00000403441 TMEM232C9JQI7 657 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 ERC2O15083 957 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 MFSD5Q6N075 450 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 NOL8Q76FK4 1167 aaKnown RBP14.65□□□□□ -0.06
PRAME-204ENST00000403441 FAM160B2Q86V87 743 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 CCDC144CPQ8IYA2 1237 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 IFNL3Q8IZI9 196 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 TMEM199Q8N511 208 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 NEDD1Q8NHV4 660 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 OTUD7AQ8TE49 926 aaPredicted RBP14.65□□□□□ -0.06
PRAME-204ENST00000403441 CHURC1Q8WUH1 139 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 TIFAQ96CG3 184 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 FGD4Q96M96 766 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 NAPBQ9H115 298 aa14.65□□□□□ -0.06
PRAME-204ENST00000403441 MCM3APO60318 1980 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 ARVCFO00192 962 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 ADCY6O43306 1168 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 IGHDP01880 384 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 SLC1A4P43007 532 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 CDK7P50613 346 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 GMCL1Q96IK5 515 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.64□□□□□ -0.073e-24■□□□□ 9.6
PRAME-204ENST00000403441 FSD1Q9BTV5 496 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 RNF146Q9NTX7 359 aa14.64□□□□□ -0.07
PRAME-204ENST00000403441 TTC28Q96AY4 2481 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 ASB14A6NK59 587 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 IRX5P78411 483 aaPredicted RBP14.63□□□□□ -0.07
PRAME-204ENST00000403441 TFAP4Q01664 338 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 CNTN2Q02246 1040 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 TNFAIP2Q03169 654 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 PPARAQ07869 468 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 GRIN2CQ14957 1233 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 TKFCQ3LXA3 575 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 PSRC1Q6PGN9 363 aaPredicted RBP14.63□□□□□ -0.07
PRAME-204ENST00000403441 CCDC129Q6ZRS4 1044 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 FAM126BQ8IXS8 530 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 SYMPKQ92797 1274 aaKnown RBP14.63□□□□□ -0.07
PRAME-204ENST00000403441 RWDD1Q9H446 243 aaPredicted RBP14.63□□□□□ -0.07
PRAME-204ENST00000403441 ZNF576Q9H609 170 aa14.63□□□□□ -0.07
PRAME-204ENST00000403441 A1CFQ9NQ94 594 aaKnown RBP14.63□□□□□ -0.07
PRAME-204ENST00000403441 CABYRO75952 493 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 CSF2RAP15509 400 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 MX1P20591 662 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 TLK2Q86UE8 772 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 FAM133AQ8N9E0 248 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 STAG1Q8WVM7 1258 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 AGBL1Q96MI9 1066 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 PPP1R12CQ9BZL4 782 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 KATNBL1Q9H079 304 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 MTIF3Q9H2K0 278 aaKnown RBP14.62□□□□□ -0.07
PRAME-204ENST00000403441 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
PRAME-204ENST00000403441 TSPY2A6NKD2 308 aa14.61□□□□□ -0.07
PRAME-204ENST00000403441 ZEB2O60315 1214 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms