RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 HOMER2Q9NSB8 354 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
LINC00544-201ENST00000400540 CTDP1Q9Y5B0 961 aaPredicted RBP14.23□□□□□ -0.13
LINC00544-201ENST00000400540 TIMP1P01033 207 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 APPP05067 770 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 PTGS1P23219 599 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 CNTN2Q02246 1040 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 RASGRP2Q7LDG7 609 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 CCDC144CPQ8IYA2 1237 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 ZNF444Q8N0Y2 327 aaPredicted RBP14.22□□□□□ -0.13
LINC00544-201ENST00000400540 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 MKL1Q969V6 931 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 GLT1D1Q96MS3 346 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 UPF3AQ9H1J1 476 aaKnown RBP14.22□□□□□ -0.13
LINC00544-201ENST00000400540 FEM1BQ9UK73 627 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 DDX49Q9Y6V7 483 aaKnown RBP14.22□□□□□ -0.13
LINC00544-201ENST00000400540 TRANK1O15050 2925 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 SCN5AQ14524 2016 aa14.22□□□□□ -0.13
LINC00544-201ENST00000400540 TMEM265A0A087WTH1 108 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.21□□□□□ -0.13
LINC00544-201ENST00000400540 GRXCR1A8MXD5 290 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 CTAGE5O15320 804 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 TTLL1O95922 423 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 BMP3P12645 472 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 CDK7P50613 346 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 GJA9P57773 515 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 BEX3Q00994 111 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 SLFN13Q68D06 897 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 C16orf59Q7L2K0 433 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 PPP1R12CQ9BZL4 782 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 ABHD16BQ9H3Z7 469 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 DCTPP1Q9H773 170 aa14.21□□□□□ -0.13
LINC00544-201ENST00000400540 ISY1Q9ULR0 285 aaKnown RBP14.21□□□□□ -0.13
LINC00544-201ENST00000400540 ASTN1O14525 1302 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 ZNF536O15090 1300 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 ELP1O95163 1332 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 MROH7Q68CQ1 1323 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.2□□□□□ -0.14
LINC00544-201ENST00000400540 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.2□□□□□ -0.14
LINC00544-201ENST00000400540 PATL2C9JE40 543 aaKnown RBP14.2□□□□□ -0.14
LINC00544-201ENST00000400540 TMEM232C9JQI7 657 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 ZFYP08048 801 aaPredicted RBP14.2□□□□□ -0.14
LINC00544-201ENST00000400540 TSPY3P0CV98 308 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 TSPY8P0CW00 308 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 ACRP10323 421 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 CSF2RAP15509 400 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 GNAT2P19087 354 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 PBX2P40425 430 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 GNASQ5JWF2 1037 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 TMEM240Q5SV17 173 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 MFSD5Q6N075 450 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 FAM126BQ8IXS8 530 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 PCSK9Q8NBP7 692 aaKnown RBP14.2□□□□□ -0.14
LINC00544-201ENST00000400540 CHST13Q8NET6 341 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 NEDD1Q8NHV4 660 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 VTI1AQ96AJ9 217 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 AGBL1Q96MI9 1066 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 FBXO40Q9UH90 709 aa14.2□□□□□ -0.14
LINC00544-201ENST00000400540 MYO9BQ13459 2157 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 TANC1Q9C0D5 1861 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 A0A0U1RQG5 324 aaPredicted RBP14.19□□□□□ -0.14
LINC00544-201ENST00000400540 SOWAHBA6NEL2 793 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 ARVCFO00192 962 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 OAZ1P54368 228 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 SNAP25P60880 206 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 TFAP4Q01664 338 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 FAM133AQ8N9E0 248 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 OTUD7AQ8TE49 926 aaPredicted RBP14.19□□□□□ -0.14
LINC00544-201ENST00000400540 TIFAQ96CG3 184 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 ZNF576Q9H609 170 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 ACAD9Q9H845 621 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 SPC25Q9HBM1 224 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 ZNF287Q9HBT7 754 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 A1CFQ9NQ94 594 aaKnown RBP14.19□□□□□ -0.14
LINC00544-201ENST00000400540 RNF146Q9NTX7 359 aa14.19□□□□□ -0.14
LINC00544-201ENST00000400540 UMODL1Q5DID0 1318 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 STAT2P52630 851 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 PPARAQ07869 468 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC00544-201ENST00000400540 PI4K2BQ8TCG2 481 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 PBX4Q9BYU1 374 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 INCENPQ9NQS7 918 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 PRDM6Q9NQX0 595 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
LINC00544-201ENST00000400540 FOXP2O15409 715 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 NMT2O60551 498 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 CD4P01730 458 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 MCCP23508 829 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 CYP2C18P33260 490 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 TNFAIP2Q03169 654 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 PDE4BQ07343 736 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 IKQ13123 557 aaPredicted RBP14.17□□□□□ -0.14
LINC00544-201ENST00000400540 MUM1L1Q5H9M0 696 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 TMEM63BQ5T3F8 832 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 RASIP1Q5U651 963 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 CCDC174Q6PII3 467 aa14.17□□□□□ -0.14
LINC00544-201ENST00000400540 CXCL17Q6UXB2 119 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms