RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 SUGCTQ9HAC7 445 aa12.19□□□□□ -0.46
CACNA1C-208ENST00000399601 PSMA7O14818 248 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 EPB41P11171 864 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 UBXN2AP68543 259 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 SNX1Q13596 522 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 B4GALNT4Q76KP1 1039 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 TEX9Q8N6V9 391 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 AKT3Q9Y243 479 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 IQCA1LA6NCM1 817 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 KRT17Q04695 432 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 PSMD2Q13200 908 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 PARP2Q9UGN5 583 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 RAD17O75943 681 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 ESRRBO95718 433 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 VCPP55072 806 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 C8orf74Q6P047 294 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 C16orf87Q6PH81 154 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 CEP70Q8NHQ1 597 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 Q9H521 79 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 CD19P15391 556 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 MAP2K2P36507 400 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 FAM160B1Q5W0V3 765 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 TCEANC2Q96MN5 208 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 GRIN2AQ12879 1464 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 EFCAB5A4FU69 1503 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 MAN1A2O60476 641 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 GIGYF1O75420 1035 aaPredicted RBP12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 MCMDC2Q4G0Z9 681 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 PRPF38AQ8NAV1 312 aaKnown RBP12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 ANAPC5Q9UJX4 755 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 STRIP2Q9ULQ0 834 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 LZTS1Q9Y250 596 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
CACNA1C-208ENST00000399601 VCAM1P19320 739 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 NLRP7Q8WX94 980 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 DDX19AQ9NUU7 478 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 ABCC11Q96J66 1382 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 ZNF263O14978 683 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 R3HDM1Q15032 1099 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 HMG20BQ9P0W2 317 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 ANGEL1Q9UNK9 670 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 ZSCAN9O15535 394 aaPredicted RBP12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 TTLL6Q8N841 843 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 PAWRQ96IZ0 340 aaKnown RBP12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 MAP10Q9P2G4 905 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 PNMA2Q9UL42 364 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 ADRA2BP18089 450 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 STX2P32856 288 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 TRIM50Q86XT4 487 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 USP6NLQ92738 828 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 HAUS3Q68CZ6 603 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 C11orf74Q86VG3 221 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 MAD1L1Q9Y6D9 718 aa12.17□□□□□ -0.46
CACNA1C-208ENST00000399601 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 WDR62O43379 1518 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 EIF4E1BA6NMX2 242 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 ANKRD20A4Q4UJ75 823 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 ANKRD20A8PQ5CZ79 823 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 ANKRD20A2Q5SQ80 823 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 ANKRD20A1Q5TYW2 823 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 FBXL13Q8NEE6 735 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 OSBPL10Q9BXB5 764 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 AFF2P51816 1311 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 TRPM2O94759 1503 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 CENPAP49450 140 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 KIF11P52732 1056 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 PSMC1P62191 440 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 DTHD1Q6ZMT9 781 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 ARMC2Q8NEN0 867 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 GDAP1Q8TB36 358 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 IP6K1Q92551 441 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 E9PMD0 336 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 MAP3K7O43318 606 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 UBL4BQ8N7F7 174 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 CEP104O60308 925 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 NOLC1Q14978 699 aaKnown RBP eCLIP12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 LZICQ8WZA0 190 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 RNF113AO15541 343 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 DNAJC6O75061 913 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 CLTAP09496 248 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 KCNJ6P48051 423 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 MFSD14CQ5VZR4 134 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 GRAMD4Q6IC98 578 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 CABS1Q96KC9 395 aa12.16□□□□□ -0.46
CACNA1C-208ENST00000399601 USP14P54578 494 aa12.15□□□□□ -0.46
CACNA1C-208ENST00000399601 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
CACNA1C-208ENST00000399601 RTKN2Q8IZC4 609 aa12.15□□□□□ -0.46
CACNA1C-208ENST00000399601 VPS16Q9H269 839 aa12.15□□□□□ -0.46
CACNA1C-208ENST00000399601 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms