RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SLC4A3P48751 1232 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 ANKRD35Q8N283 1001 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 ARRDC4Q8NCT1 418 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 CHMP4CQ96CF2 233 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 KRT23Q9C075 422 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 RANBP17Q9H2T7 1088 aaKnown RBP17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 TRIOBPQ9H2D6 2365 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 B4E1Z4 1266 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 ICAM1P05362 532 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 HABP4Q5JVS0 413 aaKnown RBP17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 PRAMEF19Q5SWL8 479 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 SYDE2Q5VT97 1194 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 ANKS1AQ92625 1134 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 AGBL1Q96MI9 1066 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 RNF146Q9NTX7 359 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 CNPY2Q9Y2B0 182 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 MCM3APO60318 1980 aa17.48■□□□□ 0.39
SMIM11A-203ENST00000399299 SLC34A2O95436 690 aa17.47■□□□□ 0.39
SMIM11A-203ENST00000399299 ZNF865P0CJ78 1059 aaPredicted RBP17.47■□□□□ 0.39
SMIM11A-203ENST00000399299 TTBK2Q6IQ55 1244 aa17.47■□□□□ 0.39
SMIM11A-203ENST00000399299 ZSCAN10Q96SZ4 725 aaPredicted RBP17.47■□□□□ 0.39
SMIM11A-203ENST00000399299 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
SMIM11A-203ENST00000399299 HOMER2Q9NSB8 354 aa17.47■□□□□ 0.39
SMIM11A-203ENST00000399299 COLQQ9Y215 455 aaPredicted RBP17.47■□□□□ 0.39
SMIM11A-203ENST00000399299 SGSM2O43147 1006 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 ALAS1P13196 640 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 AKR1A1P14550 325 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 GPATCH4Q5T3I0 446 aaKnown RBP17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 C7orf61Q8IZ16 206 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 FGD4Q96M96 766 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 TRERF1Q96PN7 1200 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 PRO3102Q9H379 93 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 ZSWIM5Q9P217 1185 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 PNMA2Q9UL42 364 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 CCPG1Q9ULG6 757 aa17.46■□□□□ 0.39
SMIM11A-203ENST00000399299 FRMPD2Q68DX3 1309 aaPredicted RBP17.46■□□□□ 0.38
SMIM11A-203ENST00000399299 KBTBD13C9JR72 458 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 POTEB2H3BUK9 544 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 SNAI1O95863 264 aaPredicted RBP17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 RARBP10826 455 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 TAL1P17542 331 aaPredicted RBP17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 SLC16A2P36021 539 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 ANO1Q5XXA6 986 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 CHRDL2Q6WN34 429 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 PNMA1Q8ND90 353 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 KAT14Q9H8E8 782 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 LCTP09848 1927 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 TNKSO95271 1327 aa17.45■□□□□ 0.38
SMIM11A-203ENST00000399299 LRRC37A2A6NM11 1700 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 SNAP25P60880 206 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 PTH1RQ03431 593 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 GJC2Q5T442 439 aaPredicted RBP17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 UBAC1Q9BSL1 405 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 SENP6Q9GZR1 1112 aaPredicted RBP17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 ABHD16BQ9H3Z7 469 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 XPNPEP3Q9NQH7 507 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 WDR19Q8NEZ3 1342 aa17.44■□□□□ 0.38
SMIM11A-203ENST00000399299 CYP21A2P08686 494 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 TRDNQ13061 729 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 LRRC41Q15345 812 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 MUM1L1Q5H9M0 696 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 ARMCX2Q7L311 632 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 CYP39A1Q9NYL5 469 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 FAM184BQ9ULE4 1060 aa17.43■□□□□ 0.38
SMIM11A-203ENST00000399299 ASB14A6NK59 587 aa17.42■□□□□ 0.38
SMIM11A-203ENST00000399299 ACVR2BQ13705 512 aa17.42■□□□□ 0.38
SMIM11A-203ENST00000399299 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
SMIM11A-203ENST00000399299 RNF180Q86T96 592 aa17.42■□□□□ 0.38
SMIM11A-203ENST00000399299 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
SMIM11A-203ENST00000399299 MAP4K1Q92918 833 aa17.42■□□□□ 0.38
SMIM11A-203ENST00000399299 RBM27Q9P2N5 1060 aaKnown RBP17.42■□□□□ 0.38
SMIM11A-203ENST00000399299 A0A1W2PPC1 479 aa17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 ADAMTS4O75173 837 aa17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 SEC23AQ15436 765 aa17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 KATNBL1Q9H079 304 aa17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 PHF24Q9UPV7 400 aa17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 MYH6P13533 1939 aa17.41■□□□□ 0.38
SMIM11A-203ENST00000399299 LOC102724159A0A0B4J2E5 919 aa17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 SNX17Q15036 470 aa17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 PWP2Q15269 919 aaKnown RBP17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 BMP2KLQ5H9B9 411 aa17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 NSMFQ6X4W1 530 aa17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 CYB5R4Q7L1T6 521 aa17.4■□□□□ 0.38
SMIM11A-203ENST00000399299 GDF15Q99988 308 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms