RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CCT6AP40227 531 aaKnown RBP12.81□□□□□ -0.36
C4orf3-201ENST00000399075 PRCPP42785 496 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 TUBB4BP68371 445 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 CYP26C1Q6V0L0 522 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 GOLGA1Q92805 767 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 MYO1AQ9UBC5 1043 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 SNED1Q8TER0 1413 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 USP17L3A6NCW0 530 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 USP17L4A6NCW7 530 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 RHOBTB3O94955 611 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 EEF1GP26641 437 aaKnown RBP12.81□□□□□ -0.36
C4orf3-201ENST00000399075 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
C4orf3-201ENST00000399075 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 PTF1AQ7RTS3 328 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 USP17L1Q7RTZ2 530 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 NOC3LQ8WTT2 800 aaKnown RBP12.81□□□□□ -0.36
C4orf3-201ENST00000399075 CPLX3Q8WVH0 158 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 TMEM47Q9BQJ4 181 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 RTFDC1Q9BY42 306 aaPredicted RBP12.81□□□□□ -0.36
C4orf3-201ENST00000399075 ZMYND12Q9H0C1 365 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 JAG2Q9Y219 1238 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 A0A1W2PQC6 194 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 UBA7P41226 1012 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 STIM1Q13586 685 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 TERF2Q15554 542 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 KRT25Q7Z3Z0 450 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 TRIM34Q9BYJ4 488 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 TAB2Q9NYJ8 693 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
C4orf3-201ENST00000399075 CLGNO14967 610 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 KLRC4O43908 158 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 PSEN1P49768 467 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 C16orf86Q6ZW13 317 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 IRF2BP1Q8IU81 584 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 CCDC24Q8N4L8 307 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 TMEM60Q9H2L4 133 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 LGALS16A8MUM7 142 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 ERVK-24P63145 666 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 INF2Q27J81 1249 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 GIMAP8Q8ND71 665 aaPredicted RBP12.8□□□□□ -0.36
C4orf3-201ENST00000399075 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 TRERF1Q96PN7 1200 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 VPS16Q9H269 839 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 LZTFL1Q9NQ48 299 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 CDC23Q9UJX2 597 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 MYH8P13535 1937 aa12.8□□□□□ -0.36
C4orf3-201ENST00000399075 PARP1P09874 1014 aaKnown RBP12.79□□□□□ -0.36
C4orf3-201ENST00000399075 PLCG2P16885 1265 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 SRGAP1Q7Z6B7 1085 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 CEP112Q8N8E3 955 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 NEDD1Q8NHV4 660 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 GPR75-ASB3A0A0A6YYF3 556 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 PSMA7O14818 248 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 PPP1R2P41236 205 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 NOVP48745 357 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 AMIGO3Q86WK7 504 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 DHTKD1Q96HY7 919 aaPredicted RBP12.79□□□□□ -0.36
C4orf3-201ENST00000399075 NUP88Q99567 741 aaPredicted RBP12.79□□□□□ -0.36
C4orf3-201ENST00000399075 FLT1P17948 1338 aa12.79□□□□□ -0.36
C4orf3-201ENST00000399075 KLRF2D3W0D1 207 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CDC25AP30304 524 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 NFIXQ14938 502 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 GRIK5Q16478 980 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 SLC4A8Q2Y0W8 1093 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CC2D1AQ6P1N0 951 aaPredicted RBP12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 IRX2Q9BZI1 471 aaPredicted RBP12.78□□□□□ -0.36
C4orf3-201ENST00000399075 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 ESYT2A0FGR8 921 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CTAGE9A4FU28 777 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 POTEB2H3BUK9 544 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 OR52Z1P0C646 297 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 IL1R1P14778 569 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 GNA11P29992 359 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 RFC4P35249 363 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 UBXN1Q04323 297 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
C4orf3-201ENST00000399075 TEX35Q5T0J7 233 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
C4orf3-201ENST00000399075 MB21D1Q8N884 522 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 SLC44A5Q8NCS7 719 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
C4orf3-201ENST00000399075 DNAJC7Q99615 494 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 C6orf50Q9HD87 102 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 PP2D1A8MPX8 630 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 KRT9P35527 623 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CDK8P49336 464 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 CHMP4BP1P59074 171 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
C4orf3-201ENST00000399075 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms