RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ALDH3A1P30838 453 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 CRKP46108 304 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 KRT25Q7Z3Z0 450 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 GPR161Q8N6U8 529 aaKnown RBP15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 ZSCAN10Q96SZ4 725 aaPredicted RBP15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 PI4KBQ9UBF8 816 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 CD2APQ9Y5K6 639 aa15.76■□□□□ 0.11
PCDHA11-201ENST00000398640 DCUN1D2Q6PH85 259 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 PLEKHA4Q9H4M7 779 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 VPS54Q9P1Q0 977 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 MYO1AQ9UBC5 1043 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 NRXN1Q9ULB1 1477 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 GMNNO75496 209 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 STK10O94804 968 aaKnown RBP15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 VWA3BQ502W6 1294 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 MICALL1Q8N3F8 863 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 EAF2Q96CJ1 260 aaPredicted RBP15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 MMS19Q96T76 1030 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 ZNF341Q9BYN7 854 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 LRRIQ1Q96JM4 1722 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 GOLGA8HP0CJ92 632 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 SAMD15Q9P1V8 674 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 FBXO11Q86XK2 927 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 PSMB7Q99436 277 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 CSRNP2Q9H175 543 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 CTTNBP2NLQ9P2B4 639 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 VIMP08670 466 aaKnown RBP15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 GPSM2P81274 684 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 UBE3CQ15386 1083 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 ZNF365Q70YC5 407 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 SPICE1Q8N0Z3 855 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 TAB2Q9NYJ8 693 aa15.75■□□□□ 0.11
PCDHA11-201ENST00000398640 SMCO2A6NFE2 343 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 SASH1O94885 1247 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 PRR16Q569H4 304 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 ATL3Q6DD88 541 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 CABP7Q86V35 215 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 FMNL3Q8IVF7 1028 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 C17orf53Q8N3J3 647 aaPredicted RBP15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 ST7Q9NRC1 585 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 ITIH3Q06033 890 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 CLUL1Q15846 466 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 EDC3Q96F86 508 aaKnown RBP15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 HGSO14964 777 aaPredicted RBP15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 SETDB1Q15047 1291 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 ARHGAP44Q17R89 818 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 NKIRAS1Q9NYS0 192 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 SPDYE16A6NNV3 312 aaPredicted RBP15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 H7C1W4 665 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 CASC4Q6P4E1 433 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 CEP57Q86XR8 500 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 ZKSCAN5Q9Y2L8 839 aa15.74■□□□□ 0.11
PCDHA11-201ENST00000398640 DPEP1P16444 411 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 PPP2R3AQ06190 1150 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 CYP26C1Q6V0L0 522 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 UBL4BQ8N7F7 174 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 CD163L1Q9NR16 1453 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 GADD45BO75293 160 aaPredicted RBP15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 HOXD10P28358 340 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 MCTP2Q6DN12 878 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 DAAM2Q86T65 1068 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 TBC1D31Q96DN5 1066 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 CFAP57Q96MR6 1250 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 MINPP1Q9UNW1 487 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 UTP11Q9Y3A2 253 aaKnown RBP15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 SF3A3Q12874 501 aaKnown RBP eCLIP15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 NOP9Q86U38 636 aaKnown RBP15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 ABI1Q8IZP0 508 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 RBSNQ9H1K0 784 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 LRFN2Q9ULH4 789 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 PPP1R2P41236 205 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 POLA2Q14181 598 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 CDC37L1Q7L3B6 337 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
PCDHA11-201ENST00000398640 DYNLL1P63167 89 aaKnown RBP15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 REXO1Q8N1G1 1221 aaKnown RBP15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 PALD1Q9ULE6 856 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 CDHR2Q9BYE9 1310 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 MYO3AQ8NEV4 1616 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 OATP04181 439 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 XKR9Q5GH70 373 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 C4orf50Q6ZRC1 276 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 CRAMP1Q96RY5 1269 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 IVLP07476 585 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 ZBTB8OSQ8IWT0 167 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 VPS52Q8N1B4 723 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 NAP1L3Q99457 506 aaPredicted RBP15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 ZNRF3Q9ULT6 936 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 JAK2O60674 1132 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 PCP11498 1178 aaKnown RBP15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 SERPINB13Q9UIV8 391 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 CNTNAP4Q9C0A0 1308 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 P4HA1P13674 534 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 BSPRYQ5W0U4 402 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 NELFBQ8WX92 580 aa15.72■□□□□ 0.11
PCDHA11-201ENST00000398640 CUTAO60888 179 aa15.71■□□□□ 0.11
PCDHA11-201ENST00000398640 TTLL1O95922 423 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms