RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
MSL3-207ENST00000398527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
MSL3-207ENST00000398527 CARMIL3Q8ND23 1372 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 PFKFB2O60825 505 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 ZMYND10O75800 440 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 CCNHP51946 323 aaPredicted RBP12.08□□□□□ -0.48
MSL3-207ENST00000398527 DGKZQ13574 1117 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 POSTNQ15063 836 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 ZMYM1Q5SVZ6 1142 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 ATG9AQ7Z3C6 839 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 SRLQ86TD4 932 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 TTC6Q86TZ1 520 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 STK11IPQ8N1F8 1099 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 JARID2Q92833 1246 aaPredicted RBP12.08□□□□□ -0.48
MSL3-207ENST00000398527 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
MSL3-207ENST00000398527 UIMC1Q96RL1 719 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 PLA2G12BQ9BX93 195 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 MAK16Q9BXY0 300 aaKnown RBP12.08□□□□□ -0.48
MSL3-207ENST00000398527 TMA7Q9Y2S6 64 aaKnown RBP12.08□□□□□ -0.48
MSL3-207ENST00000398527 VPS37CA5D8V6 355 aaPredicted RBP12.08□□□□□ -0.48
MSL3-207ENST00000398527 SPTLC2O15270 562 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 CA12O43570 354 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 SERPINB2P05120 415 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 PLEKHG6Q3KR16 790 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 NECAB1Q8N987 351 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 C3orf20Q8ND61 904 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 SH3TC2Q8TF17 1288 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 HPS3Q969F9 1004 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 MTRQ99707 1265 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 DBNDD2Q9BQY9 259 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 QPCTLQ9NXS2 382 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 HACL1Q9UJ83 578 aa12.08□□□□□ -0.48
MSL3-207ENST00000398527 DDX60Q8IY21 1712 aaKnown RBP12.07□□□□□ -0.48
MSL3-207ENST00000398527 LINC00854A0A1B0GVQ3 168 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 CDR1P51861 262 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 EVCP57679 992 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 ADCY1Q08828 1119 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 MAP3K11Q16584 847 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 INTS5Q6P9B9 1019 aaKnown RBP12.07□□□□□ -0.48
MSL3-207ENST00000398527 DHX32Q7L7V1 743 aaKnown RBP12.07□□□□□ -0.48
MSL3-207ENST00000398527 DZIP1Q86YF9 867 aaKnown RBP12.07□□□□□ -0.48
MSL3-207ENST00000398527 PEX5LQ8IYB4 626 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 ATP11CQ8NB49 1132 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 FAM200AQ8TCP9 573 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 ZFPM2Q8WW38 1151 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
MSL3-207ENST00000398527 XPO4Q9C0E2 1151 aaKnown RBP12.07□□□□□ -0.48
MSL3-207ENST00000398527 SPTLC3Q9NUV7 552 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 ZNF219Q9P2Y4 722 aaPredicted RBP12.07□□□□□ -0.48
MSL3-207ENST00000398527 TBK1Q9UHD2 729 aa12.07□□□□□ -0.48
MSL3-207ENST00000398527 TLDC2A0PJX2 215 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 EME2A4GXA9 379 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 LRRC10BA6NIK2 292 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 EYA2O00167 538 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 RESTQ13127 1097 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 MAP1SQ66K74 1059 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 OLFML1Q6UWY5 402 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 DCLK2Q8N568 766 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 GIMAP7Q8NHV1 300 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 NUP62CLQ9H1M0 184 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 ZBTB3Q9H5J0 574 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 CTNNA3Q9UI47 895 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 CFAP45Q9UL16 551 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 ANKRD31Q8N7Z5 1873 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 ADCY5O95622 1261 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 STARD3NLO95772 234 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 FGAP02671 866 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 ZFYP08048 801 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 CYP21A2P08686 494 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 HCLS1P14317 486 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 ERCC5P28715 1186 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 EPHX2P34913 555 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 RAB27AP51159 221 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 PNMA8AQ86V59 439 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 SPC24Q8NBT2 197 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 LEO1Q8WVC0 666 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 PAG1Q9NWQ8 432 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 LCMT1Q9UIC8 334 aa12.06□□□□□ -0.48
MSL3-207ENST00000398527 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
MSL3-207ENST00000398527 FAM25EA8MYX2 175 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 KIAA0754O94854 1291 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 BIRC3Q13489 604 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 SIM2Q14190 667 aaPredicted RBP12.05□□□□□ -0.48
MSL3-207ENST00000398527 CYP4F22Q6NT55 531 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 KIF6Q6ZMV9 814 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 TXLNBQ8N3L3 684 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 HELQQ8TDG4 1101 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 ZNF274Q96GC6 653 aaPredicted RBP12.05□□□□□ -0.48
MSL3-207ENST00000398527 POM121Q96HA1 1249 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 CLSTN2Q9H4D0 955 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 KMT5AQ9NQR1 393 aa12.05□□□□□ -0.48
MSL3-207ENST00000398527 ATP6V0A2Q9Y487 856 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms