RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 TMTC3Q6ZXV5 915 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 CMTR1Q8N1G2 835 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 SRBD1Q8N5C6 995 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 ZNF274Q96GC6 653 aaPredicted RBP20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 RIOX1Q9H6W3 641 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 EFCC1Q9HA90 598 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 VAT1LQ9HCJ6 419 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 RBM28Q9NW13 759 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 TPCN1Q9ULQ1 816 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 MGAMO43451 1857 aa20.18■□□□□ 0.82
CSNK1D-204ENST00000398519 PSMC4P43686 418 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 KIF22Q14807 665 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 CDC37Q16543 378 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 NOL8Q76FK4 1167 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 RIOX2Q8IUF8 465 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 MTMR8Q96EF0 704 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 TRIM47Q96LD4 638 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 AGBL1Q96MI9 1066 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 LZTS2Q9BRK4 669 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 SPZ1Q9BXG8 430 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 RIPK3Q9Y572 518 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 ICAM1P05362 532 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 ERCC3P19447 782 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 SMARCA1P28370 1054 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 SHCBP1Q8NEM2 672 aa20.17■□□□□ 0.82
CSNK1D-204ENST00000398519 TAL1P17542 331 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 MAPK4P31152 587 aa20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 ADD1P35611 737 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 FCGRTP55899 365 aa20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 CCT2P78371 535 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 PPP2R5BQ15173 497 aa20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 QRICH1Q2TAL8 776 aa20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
CSNK1D-204ENST00000398519 TNPO2O14787 897 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 FMNL1O95466 1100 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 SLC25A27O95847 323 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 SLC4A3P48751 1232 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 FUT2Q10981 343 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 STK3Q13188 491 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 GPR142Q7Z601 462 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 NCAPG2Q86XI2 1143 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 HOMER1Q86YM7 354 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 CCAR1Q8IX12 1150 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 CCDC82Q8N4S0 544 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 PIGSQ96S52 555 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 NCOA5Q9HCD5 579 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 CCPG1Q9ULG6 757 aa20.15■□□□□ 0.82
CSNK1D-204ENST00000398519 CNTNAP5Q8WYK1 1306 aa20.14■□□□□ 0.82
CSNK1D-204ENST00000398519 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
CSNK1D-204ENST00000398519 ZBTB5O15062 677 aa20.14■□□□□ 0.81
CSNK1D-204ENST00000398519 LARGE1O95461 756 aa20.14■□□□□ 0.81
CSNK1D-204ENST00000398519 WDR78Q5VTH9 848 aa20.14■□□□□ 0.81
CSNK1D-204ENST00000398519 MROH8Q9H579 483 aa20.14■□□□□ 0.81
CSNK1D-204ENST00000398519 HTTP42858 3142 aa20.14■□□□□ 0.81
CSNK1D-204ENST00000398519 BAZ2BQ9UIF8 2168 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-204ENST00000398519 PPP1R11O60927 126 aaPredicted RBP20.13■□□□□ 0.81
CSNK1D-204ENST00000398519 COPB2P35606 906 aa20.13■□□□□ 0.81
CSNK1D-204ENST00000398519 ME3Q16798 604 aa20.13■□□□□ 0.81
CSNK1D-204ENST00000398519 PLEKHH3Q7Z736 793 aa20.13■□□□□ 0.81
CSNK1D-204ENST00000398519 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
CSNK1D-204ENST00000398519 HOMER2Q9NSB8 354 aa20.13■□□□□ 0.81
CSNK1D-204ENST00000398519 PLXNB2O15031 1838 aa20.13■□□□□ 0.81
CSNK1D-204ENST00000398519 PFKFB2O60825 505 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 ALAS1P13196 640 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 SCRN1Q12765 414 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 OTOP1Q7RTM1 612 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 RRP36Q96EU6 259 aaKnown RBP20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 SLKQ9H2G2 1235 aaPredicted RBP20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 MYH6P13533 1939 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 SMCHD1A6NHR9 2005 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 PNMA6FA0A0J9YX94 578 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 ST18O60284 1047 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 GNRH1P01148 92 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 ARHGEF6Q15052 776 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 NTRK3Q16288 839 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 TKFCQ3LXA3 575 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 USH1GQ495M9 461 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 FBXO11Q86XK2 927 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 IL27Q8NEV9 243 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 COA7Q96BR5 231 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 CWC22Q9HCG8 908 aaKnown RBP20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 RNF146Q9NTX7 359 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 PNMA2Q9UL42 364 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 LIMCH1Q9UPQ0 1083 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 TRIM17Q9Y577 477 aa20.12■□□□□ 0.81
CSNK1D-204ENST00000398519 hCG_1642624A0A1W2PR95 340 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 CD2BP2O95400 341 aaKnown RBP20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 PTPREP23469 700 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 PRKCZQ05513 592 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 MUM1L1Q5H9M0 696 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 CHST13Q8NET6 341 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 TRERF1Q96PN7 1200 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 AMNQ9BXJ7 453 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 GABRQQ9UN88 632 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 ZNF236Q9UL36 1845 aa20.11■□□□□ 0.81
CSNK1D-204ENST00000398519 GRB14Q14449 540 aa20.1■□□□□ 0.81
CSNK1D-204ENST00000398519 MORN1Q5T089 497 aa20.1■□□□□ 0.81
CSNK1D-204ENST00000398519 CTU1Q7Z7A3 348 aaKnown RBP20.1■□□□□ 0.81
CSNK1D-204ENST00000398519 NECAB1Q8N987 351 aa20.1■□□□□ 0.81
CSNK1D-204ENST00000398519 ACAD9Q9H845 621 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms