RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 THEGQ9P2T0 379 aa3□□□□□ -1.93
CHD9-202ENST00000398510 SPATA31D1Q6ZQQ2 1576 aa3□□□□□ -1.93
CHD9-202ENST00000398510 POTEB3A0JP26 581 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ZBTB43O43298 467 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 XPAP23025 273 aaPredicted RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 STAT2P52630 851 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 NUTM2GQ5VZR2 741 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 POTEBQ6S5H4 581 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ARFGAP2Q8N6H7 521 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD9-202ENST00000398510 LRRC37BQ96QE4 947 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 KRCC1Q9NPI7 259 aaPredicted RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 MRPL40Q9NQ50 206 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 TBC1D7Q9P0N9 293 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 MAP3K15Q6ZN16 1313 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 MAST2Q6P0Q8 1798 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SENP3-EIF4A1A0A087X0R7 540 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 LRRIQ3A6PVS8 624 aaPredicted RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 MOCS3O95396 460 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 RPS12P25398 132 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 KCNJ6P48051 423 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 JAK3P52333 1124 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 CLEC4GQ6UXB4 293 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SLC7A3Q8WY07 619 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 EPSTI1Q96J88 318 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 Q9H521 79 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 STN1Q9H668 368 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 MRFAP1Q9Y605 127 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SLIT3O75094 1523 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 A0A1W2PP64 1363 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ARHGAP23Q9P227 1491 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SLC1A4P43007 532 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 PCBP1Q15365 356 aaKnown RBP eCLIP2.99□□□□□ -1.939e-6■■■■■ 29.7
CHD9-202ENST00000398510 REXO1Q8N1G1 1221 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 MORC4Q8TE76 937 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 AP5M1Q9H0R1 490 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SLC4A7Q9Y6M7 1214 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ERBB3P21860 1342 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 RFX7Q2KHR2 1363 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 KIAA0391O15091 583 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 RNASELQ05823 741 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 SLC4A8Q2Y0W8 1093 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 CCDC38Q502W7 563 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 HEATR3Q7Z4Q2 680 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ZKSCAN3Q9BRR0 538 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ATP6V0A4Q9HBG4 840 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SAMD15Q9P1V8 674 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SLAIN2Q9P270 581 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 HESX1Q9UBX0 185 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 NIP7Q9Y221 180 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD9-202ENST00000398510 VPS9D1Q9Y2B5 631 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 PPP2R3BQ9Y5P8 575 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ABCC4O15439 1325 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 JCADQ9P266 1359 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ARHGEF35A5YM69 484 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 MFSD14CQ5VZR4 134 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 KLC3Q6P597 504 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 VPS52Q8N1B4 723 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 FOXP3Q9BZS1 431 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 HOXA2O43364 376 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 HNRNPRO43390 633 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 LDHAP00338 332 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 S100BP04271 92 aaPredicted RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 TMPOP42166 694 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 RNF187Q5TA31 235 aaPredicted RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 TSC1Q92574 1164 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 PFASO15067 1338 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 NUP188Q5SRE5 1749 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 PTPDC1A2A3K4 754 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SNTNA6NMZ2 147 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 DDAH1O94760 285 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SATB1Q01826 763 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 CREMQ03060 361 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 DPYDQ12882 1025 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 SCG3Q8WXD2 468 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 JAKMIP1Q96N16 626 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 SPZ1Q9BXG8 430 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 MID2Q9UJV3 735 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 MAP3K2Q9Y2U5 619 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 LEMD3Q9Y2U8 911 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ELP1O95163 1332 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ESPNB1AK53 854 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 TLR3O15455 904 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 GAP43P17677 238 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 MTIF2P46199 727 aaKnown RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 DLGAP5Q15398 846 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 PDCD2Q16342 344 aaPredicted RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 SLFN12LQ6IEE8 588 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 CTR9Q6PD62 1173 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 RAB44Q7Z6P3 723 aaPredicted RBP2.99□□□□□ -1.93
CHD9-202ENST00000398510 MICALL1Q8N3F8 863 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 NRBF2Q96F24 287 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 NUF2Q9BZD4 464 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 KIAA1586Q9HCI6 787 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ATG3Q9NT62 314 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 TEKT2Q9UIF3 430 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 RWDD3Q9Y3V2 267 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 DISP2A7MBM2 1401 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 ATRNO75882 1429 aa2.99□□□□□ -1.93
CHD9-202ENST00000398510 TIAM2Q8IVF5 1701 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms