RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 PRR12Q9ULL5 1215 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 A0A0G2JMZ2 1700 aa13.23□□□□□ -0.29
PPME1-202ENST00000398427 IGF2BP3O00425 579 aaKnown RBP eCLIP13.22□□□□□ -0.298e-7■■■■□ 22.4
PPME1-202ENST00000398427 KIF23Q02241 960 aaPredicted RBP13.22□□□□□ -0.29
PPME1-202ENST00000398427 CCDC173Q0VFZ6 552 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 ANKRD23Q86SG2 305 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 CHURC1Q8WUH1 139 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 ASCC2Q9H1I8 757 aaPredicted RBP13.22□□□□□ -0.29
PPME1-202ENST00000398427 JMJD4Q9H9V9 463 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 VAT1LQ9HCJ6 419 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 PPP1R9AQ9ULJ8 1098 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 THSD7BQ9C0I4 1608 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 PTPDC1A2A3K4 754 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 PDHXO00330 501 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
PPME1-202ENST00000398427 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
PPME1-202ENST00000398427 SPDYE16A6NNV3 312 aaPredicted RBP13.21□□□□□ -0.29
PPME1-202ENST00000398427 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.29
PPME1-202ENST00000398427 VEGFBP49765 207 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 SNAP25P60880 206 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 COG2Q14746 738 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 CPLX2Q6PUV4 134 aaKnown RBP13.21□□□□□ -0.29
PPME1-202ENST00000398427 PRPF38AQ8NAV1 312 aaKnown RBP13.21□□□□□ -0.29
PPME1-202ENST00000398427 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 ATG4CQ96DT6 458 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.29
PPME1-202ENST00000398427 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 CDKL5O76039 1030 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 FMNL1O95466 1100 aaPredicted RBP13.21□□□□□ -0.29
PPME1-202ENST00000398427 DSG3P32926 999 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
PPME1-202ENST00000398427 SREBF2Q12772 1141 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.29
PPME1-202ENST00000398427 POTEEQ6S8J3 1075 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 MTMR8Q96EF0 704 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 PIGSQ96S52 555 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 SLC45A1Q9Y2W3 748 aa13.21□□□□□ -0.29
PPME1-202ENST00000398427 MYPNQ86TC9 1320 aa13.21□□□□□ -0.3
PPME1-202ENST00000398427 CYP2C8P10632 490 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 FDPSP14324 419 aaKnown RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 INHBEP58166 350 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 IFNL1Q8IU54 200 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 DDX11Q96FC9 970 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 ADAMTS5Q9UNA0 930 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 TM4SF4P48230 202 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 HERVK_113P62684 666 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 INTS4Q96HW7 963 aaKnown RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 RANBP17Q9H2T7 1088 aaKnown RBP13.2□□□□□ -0.3
PPME1-202ENST00000398427 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
PPME1-202ENST00000398427 SMCHD1A6NHR9 2005 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 VWA5AO00534 786 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
PPME1-202ENST00000398427 OSBPP22059 807 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 SSRP1Q08945 709 aaKnown RBP13.19□□□□□ -0.3
PPME1-202ENST00000398427 PKN1Q16512 942 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
PPME1-202ENST00000398427 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 HOXC10Q9NYD6 342 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
PPME1-202ENST00000398427 ZBTB5O15062 677 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 PPP1R11O60927 126 aaPredicted RBP13.19□□□□□ -0.3
PPME1-202ENST00000398427 LBX2Q6XYB7 198 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 TRIM22Q8IYM9 498 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 REPS2Q8NFH8 660 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 CHMP5Q9NZZ3 219 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 ORC3Q9UBD5 711 aaPredicted RBP13.19□□□□□ -0.3
PPME1-202ENST00000398427 PNMA3Q9UL41 463 aa13.19□□□□□ -0.3
PPME1-202ENST00000398427 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 ZNF500O60304 480 aaPredicted RBP13.18□□□□□ -0.3
PPME1-202ENST00000398427 PEX10O60683 326 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 TAL1P17542 331 aaPredicted RBP13.18□□□□□ -0.3
PPME1-202ENST00000398427 CCDC174Q6PII3 467 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 ZCCHC17Q9NP64 241 aaKnown RBP13.18□□□□□ -0.3
PPME1-202ENST00000398427 SMC3Q9UQE7 1217 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 ZNF536O15090 1300 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 DEXIO95424 95 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 GJB2P29033 226 aa13.18□□□□□ -0.3
PPME1-202ENST00000398427 HMGN5P82970 282 aaKnown RBP13.18□□□□□ -0.3
PPME1-202ENST00000398427 AKAP17AQ02040 695 aaKnown RBP13.18□□□□□ -0.3
PPME1-202ENST00000398427 PFKFB3Q16875 520 aaPredicted RBP13.18□□□□□ -0.3
PPME1-202ENST00000398427 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
PPME1-202ENST00000398427 MAP2K2P36507 400 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 TMEM132BQ14DG7 1078 aa13.17□□□□□ -0.3
PPME1-202ENST00000398427 SMCR8Q8TEV9 937 aaPredicted RBP13.17□□□□□ -0.3
PPME1-202ENST00000398427 GPKOWQ92917 476 aaPredicted RBP eCLIP13.17□□□□□ -0.33e-6■□□□□ 9.4
PPME1-202ENST00000398427 PARK7Q99497 189 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms