RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 GOLGA6BA6NDN3 693 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 FGFR2P21802 821 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 PRCPP42785 496 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 CCT5P48643 541 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 RBM5P52756 815 aaKnown RBP eCLIP9.24□□□□□ -0.93
TCF4-203ENST00000398339 PPFIA1Q13136 1202 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 RASGRF1Q13972 1273 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 PPP2R5AQ15172 486 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 PUM3Q15397 648 aaKnown RBP9.24□□□□□ -0.93
TCF4-203ENST00000398339 SKIDA1Q1XH10 827 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.24□□□□□ -0.93
TCF4-203ENST00000398339 ZCRB1Q8TBF4 217 aaKnown RBP9.24□□□□□ -0.93
TCF4-203ENST00000398339 DEF6Q9H4E7 631 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 FAM184BQ9ULE4 1060 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 V9GY48 417 aaPredicted RBP9.24□□□□□ -0.93
TCF4-203ENST00000398339 TNKSO95271 1327 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 SPATA31A3Q5VYP0 1347 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 PAPPAQ13219 1627 aa9.24□□□□□ -0.93
TCF4-203ENST00000398339 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 ZNF185O15231 689 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 CYLC1P35663 651 aaPredicted RBP9.23□□□□□ -0.93
TCF4-203ENST00000398339 PPARAQ07869 468 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 C2orf54Q08AI8 447 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 NPY5RQ15761 445 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 IQCEQ6IPM2 695 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 EXOC8Q8IYI6 725 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 ADSSL1Q8N142 457 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
TCF4-203ENST00000398339 LACRTQ9GZZ8 138 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 PDS5AQ29RF7 1337 aaKnown RBP9.23□□□□□ -0.93
TCF4-203ENST00000398339 TRIM49BA6NDI0 452 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 EBAG9O00559 213 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 IPO7O95373 1038 aaKnown RBP9.23□□□□□ -0.93
TCF4-203ENST00000398339 PLEKHA8P1O95397 391 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 GPTP24298 496 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 EEF1GP26641 437 aaKnown RBP9.23□□□□□ -0.93
TCF4-203ENST00000398339 IL17AQ16552 155 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
TCF4-203ENST00000398339 CCDC91Q7Z6B0 441 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 NLRP10Q86W26 655 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 AMOTL1Q8IY63 956 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 MMGT1Q8N4V1 131 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 HELBQ8NG08 1087 aaPredicted RBP9.23□□□□□ -0.93
TCF4-203ENST00000398339 FAM169AQ9Y6X4 670 aa9.23□□□□□ -0.93
TCF4-203ENST00000398339 GOLGA8KD6RF30 607 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 PES1O00541 588 aaKnown RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 IRS4O14654 1257 aaPredicted RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 ERLIN2O94905 339 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 IDEP14735 1019 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 SCP2P22307 547 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 NKX1-1Q15270 411 aaPredicted RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 MCTP2Q6DN12 878 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 CCDC70Q6NSX1 233 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 GBP6Q6ZN66 633 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 ESR2Q92731 530 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 MKL1Q969V6 931 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 CAPS2Q9BXY5 557 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 EIF3HO15372 352 aaKnown RBP eCLIP9.22□□□□□ -0.93
TCF4-203ENST00000398339 SRGNP10124 158 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 SLC5A1P13866 664 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 PAX7P23759 505 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 LIG3P49916 1009 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 DNM2P50570 870 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 PMS1P54277 932 aaKnown RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 HLFQ16534 295 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 SND1Q7KZF4 910 aaKnown RBP eCLIP9.22□□□□□ -0.93
TCF4-203ENST00000398339 CCDC170Q8IYT3 715 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 ENAHQ8N8S7 591 aaPredicted RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 RUBCNQ92622 972 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 KAT2BQ92831 832 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 DDX17Q92841 729 aaKnown RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 SH3GL2Q99962 352 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 TTYH3Q9C0H2 523 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 EHD4Q9H223 541 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 NHEJ1Q9H9Q4 299 aaPredicted RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 JADE2Q9NQC1 790 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 ZNHIT6Q9NWK9 470 aaKnown RBP9.22□□□□□ -0.93
TCF4-203ENST00000398339 GRIN2DO15399 1336 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 MROH5Q6ZUA9 1318 aa9.22□□□□□ -0.93
TCF4-203ENST00000398339 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.93
TCF4-203ENST00000398339 TRAPPC10P48553 1259 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 INHBEP58166 350 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 GNGT1P63211 74 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 ZNF572Q7Z3I7 529 aaPredicted RBP9.21□□□□□ -0.93
TCF4-203ENST00000398339 CATIPQ7Z7H3 387 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 CREG2Q8IUH2 290 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 MIGA1Q8NAN2 632 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 BCAS4Q8TDM0 211 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 CCDC97Q96F63 343 aaPredicted RBP9.21□□□□□ -0.93
TCF4-203ENST00000398339 ZSCAN10Q96SZ4 725 aaPredicted RBP9.21□□□□□ -0.93
TCF4-203ENST00000398339 NUCKS1Q9H1E3 243 aaKnown RBP9.21□□□□□ -0.93
TCF4-203ENST00000398339 AGPAT5Q9NUQ2 364 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 MAGEC2Q9UBF1 373 aaPredicted RBP9.21□□□□□ -0.93
TCF4-203ENST00000398339 DOCK2Q92608 1830 aa9.21□□□□□ -0.93
TCF4-203ENST00000398339 SHTN1A0MZ66 631 aa9.21□□□□□ -0.94
TCF4-203ENST00000398339 MACROD2A1Z1Q3 448 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms