RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FAM8A1Q9UBU6 413 aa4.52□□□□□ -1.69
CD47-203ENST00000398258 TTF2Q9UNY4 1162 aaKnown RBP4.52□□□□□ -1.69
CD47-203ENST00000398258 TACR2P21452 398 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 HDLBPQ00341 1268 aaKnown RBP4.51□□□□□ -1.69
CD47-203ENST00000398258 FANCCQ00597 558 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 PDE4BQ07343 736 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 CDSNQ15517 529 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 MAP3K11Q16584 847 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 CLEC16AQ2KHT3 1053 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 TSNAXIP1Q2TAA8 658 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 TMEM201Q5SNT2 666 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 SAPCD2Q86UD0 394 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 SLCO6A1Q86UG4 719 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 SLFN12Q8IYM2 578 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 C8orf37Q96NL8 207 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 ASPNQ9BXN1 380 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 USP31Q70CQ4 1352 aa4.51□□□□□ -1.69
CD47-203ENST00000398258 SH3D21A4FU49 640 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 SYPP08247 313 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 PRKCAP17252 672 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 PLCG1P19174 1290 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 LIG3P49916 1009 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 ST13P50502 369 aaKnown RBP4.5□□□□□ -1.69
CD47-203ENST00000398258 RPL6Q02878 288 aaKnown RBP4.5□□□□□ -1.69
CD47-203ENST00000398258 RAD51AP2Q09MP3 1159 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 OLFML2BQ68BL8 750 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 DAGLBQ8NCG7 672 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 ERVK13-1Q9NX77 482 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 VTI1BQ9UEU0 232 aa4.5□□□□□ -1.69
CD47-203ENST00000398258 MC3RP41968 323 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 KRTAP10-9P60411 292 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 FOXO4P98177 505 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 MEI1Q5TIA1 1274 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 CRIP3Q6Q6R5 217 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 TMEM87AQ8NBN3 555 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 LINC00116Q8NCU8 138 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 TMEM52Q8NDY8 209 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 SSBP3Q9BWW4 388 aaPredicted RBP4.49□□□□□ -1.69
CD47-203ENST00000398258 SLITRK6Q9H5Y7 841 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 ACSL6Q9UKU0 697 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 TLR6Q9Y2C9 796 aa4.49□□□□□ -1.69
CD47-203ENST00000398258 TNNI2P48788 182 aa4.48□□□□□ -1.69
CD47-203ENST00000398258 CCDC85BQ15834 202 aaPredicted RBP4.48□□□□□ -1.69
CD47-203ENST00000398258 GALNT18Q6P9A2 607 aa4.48□□□□□ -1.69
CD47-203ENST00000398258 ENOX1Q8TC92 643 aaKnown RBP4.48□□□□□ -1.69
CD47-203ENST00000398258 JARID2Q92833 1246 aaPredicted RBP4.48□□□□□ -1.69
CD47-203ENST00000398258 FCRL2Q96LA5 508 aaPredicted RBP4.48□□□□□ -1.69
CD47-203ENST00000398258 KIF2CQ99661 725 aa4.48□□□□□ -1.69
CD47-203ENST00000398258 IMPACTQ9P2X3 320 aa4.48□□□□□ -1.69
CD47-203ENST00000398258 TAF6LQ9Y6J9 622 aa4.48□□□□□ -1.69
CD47-203ENST00000398258 ZNF76P36508 570 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 MAPKAPK2P49137 400 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 ZC3H6P61129 1189 aaKnown RBP4.47□□□□□ -1.69
CD47-203ENST00000398258 CYP4F8P98187 520 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 TAF1CQ15572 869 aaPredicted RBP4.47□□□□□ -1.69
CD47-203ENST00000398258 TBC1D10BQ4KMP7 808 aaPredicted RBP4.47□□□□□ -1.69
CD47-203ENST00000398258 ERMP1Q7Z2K6 904 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 NUP43Q8NFH3 380 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 RNF34Q969K3 372 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 LOXL4Q96JB6 756 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 JMJD8Q96S16 334 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 NOC4LQ9BVI4 516 aaKnown RBP4.47□□□□□ -1.69
CD47-203ENST00000398258 TGIF2Q9GZN2 237 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 MIR1-1HGQ9H1L0 117 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 TNFRSF10DQ9UBN6 386 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 POLR3KQ9Y2Y1 108 aaPredicted RBP4.47□□□□□ -1.69
CD47-203ENST00000398258 PMF1-BGLAPU3KQ54 211 aa4.47□□□□□ -1.69
CD47-203ENST00000398258 WTIPA6NIX2 430 aaPredicted RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 F6X3S4 739 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 UBOX5O94941 541 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 PRAMEF1O95521 474 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 YARSP54577 528 aaKnown RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 PCBP3P57721 371 aaKnown RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 MVKQ03426 396 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 LAPTM5Q13571 262 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 ZC3H14Q6PJT7 736 aaKnown RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 BNC2Q6ZN30 1099 aaPredicted RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 NT5DC4Q86YG4 428 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 CARFQ8N187 725 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 ZNF655Q8N720 491 aaPredicted RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 SH3RF3Q8TEJ3 882 aaPredicted RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 NAF1Q96HR8 494 aaKnown RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 SAMD11Q96NU1 681 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 PCED1AQ9H1Q7 454 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 REV1Q9UBZ9 1251 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 KLHL3Q9UH77 587 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 ST6GALNAC2Q9UJ37 374 aa4.46□□□□□ -1.7
CD47-203ENST00000398258 ING1Q9UK53 422 aaPredicted RBP4.46□□□□□ -1.7
CD47-203ENST00000398258 FAM221AA4D161 298 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 CYR61O00622 381 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 PFKLP17858 780 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 ERCC5P28715 1186 aaPredicted RBP4.45□□□□□ -1.7
CD47-203ENST00000398258 ARL4AP40617 200 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 GDF5P43026 501 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 KLF10Q13118 480 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 ZNF761Q86XN6 746 aaPredicted RBP4.45□□□□□ -1.7
CD47-203ENST00000398258 NLGN1Q8N2Q7 840 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 TTC9BQ8N6N2 239 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 CCDC74BQ96LY2 380 aa4.45□□□□□ -1.7
CD47-203ENST00000398258 NOX5Q96PH1 765 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms