RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 MIEF2Q96C03 454 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 MAFFQ9ULX9 164 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 PACSIN2Q9UNF0 486 aaPredicted RBP13.99□□□□□ -0.17
CCBE1-201ENST00000398179 MAD1L1Q9Y6D9 718 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 GNAI3P08754 354 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 HSPA8P11142 646 aaKnown RBP13.99□□□□□ -0.17
CCBE1-201ENST00000398179 ZC3H18Q86VM9 953 aaKnown RBP13.99□□□□□ -0.17
CCBE1-201ENST00000398179 SMC5Q8IY18 1101 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 TSGA10Q9BZW7 698 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 CNNM2Q9H8M5 875 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 LRRIQ4A6NIV6 560 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 PRDM1O75626 825 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 LDHAP00338 332 aaKnown RBP13.99□□□□□ -0.17
CCBE1-201ENST00000398179 TRIM22Q8IYM9 498 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 CARD14Q9BXL6 1004 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 TRIM45Q9H8W5 580 aaPredicted RBP13.99□□□□□ -0.17
CCBE1-201ENST00000398179 ARL2BPQ9Y2Y0 163 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 GNAT1P11488 350 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 TRIM27P14373 513 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 BBS9Q3SYG4 887 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 RUFY4Q6ZNE9 571 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 VPS52Q8N1B4 723 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 LZTS1Q9Y250 596 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 COTL1Q14019 142 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 CENPTQ96BT3 561 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 KLC4Q9NSK0 619 aa13.99□□□□□ -0.17
CCBE1-201ENST00000398179 ALOX15P16050 662 aaPredicted RBP13.98□□□□□ -0.17
CCBE1-201ENST00000398179 RASGRF1Q13972 1273 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 DCLK2Q8N568 766 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 MAIP1Q8WWC4 291 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 RMDN1Q96DB5 314 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 ZSCAN31Q96LW9 406 aaPredicted RBP13.98□□□□□ -0.17
CCBE1-201ENST00000398179 ZNF285Q96NJ3 590 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 HMGB3O15347 200 aaKnown RBP13.98□□□□□ -0.17
CCBE1-201ENST00000398179 MYL1P05976 194 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 FGFR2P21802 821 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 TTC39AQ5SRH9 613 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 ZNF554Q86TJ5 538 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 TRIM50Q86XT4 487 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 IFT20Q8IY31 132 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 CPLX3Q8WVH0 158 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 RHBDL3P58872 404 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 CAPN12Q6ZSI9 719 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 TAB3Q8N5C8 712 aaPredicted RBP13.98□□□□□ -0.17
CCBE1-201ENST00000398179 GNAI2P04899 355 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 GSTA2P09210 222 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 KRT3P12035 628 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 EIF2B2P49770 351 aaKnown RBP13.98□□□□□ -0.17
CCBE1-201ENST00000398179 CSE1LP55060 971 aaKnown RBP13.98□□□□□ -0.17
CCBE1-201ENST00000398179 EFR3AQ14156 821 aa13.98□□□□□ -0.17
CCBE1-201ENST00000398179 BAIAP3O94812 1187 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 C4BPBP20851 252 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 PDE6CP51160 858 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 YWHAEP62258 255 aaKnown RBP13.97□□□□□ -0.17
CCBE1-201ENST00000398179 NAALADL2Q58DX5 795 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 DGKKQ5KSL6 1271 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 LVRNQ6Q4G3 990 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 MCM10Q7L590 875 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 ZBTB40Q9NUA8 1239 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 FESP07332 822 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 ADD2P35612 726 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 UHMK1Q8TAS1 419 aaKnown RBP13.97□□□□□ -0.17
CCBE1-201ENST00000398179 RBSNQ9H1K0 784 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 TTLL3Q9Y4R7 772 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 E7ENQ6 273 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 ECEL1O95672 775 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 BLOC1S2Q6QNY1 142 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 CNNM3Q8NE01 707 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 NDUFA13Q9P0J0 144 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 DCDC2Q9UHG0 476 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 MXI1P50539 228 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 MRPS9P82933 396 aaKnown RBP13.97□□□□□ -0.17
CCBE1-201ENST00000398179 TNNI3KQ59H18 835 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 DENND6AQ8IWF6 608 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 PM20D2Q8IYS1 436 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 FAM177BA6PVY3 158 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 AKR1D1P51857 326 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 CCDC26Q8TAB7 109 aa13.97□□□□□ -0.17
CCBE1-201ENST00000398179 FHOD3Q2V2M9 1422 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 MAP3K10Q02779 954 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 KCTD2Q14681 263 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 ANKRD13BQ86YJ7 626 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 PSMD14O00487 310 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 PSMA7O14818 248 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 PPP2R1AP30153 589 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 CYP2C19P33261 490 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
CCBE1-201ENST00000398179 TJAP1Q5JTD0 557 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 RCSD1Q6JBY9 416 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 GORASP1Q9BQQ3 440 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 C6orf118Q5T5N4 469 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 LSM14AQ8ND56 463 aaKnown RBP13.96□□□□□ -0.17
CCBE1-201ENST00000398179 IL1RAPL1Q9NZN1 696 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 SNX6Q9UNH7 406 aa13.96□□□□□ -0.17
CCBE1-201ENST00000398179 IGHMBP2P38935 993 aaKnown RBP13.96□□□□□ -0.18
CCBE1-201ENST00000398179 AFMP43652 599 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms