RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PFASO15067 1338 aa29.76■■■□□ 2.36
U2AF1-203ENST00000398137 CASTP20810 708 aaKnown RBP29.76■■■□□ 2.35
U2AF1-203ENST00000398137 MFSD14CQ5VZR4 134 aa29.76■■■□□ 2.35
U2AF1-203ENST00000398137 ANKS1AQ92625 1134 aa29.76■■■□□ 2.35
U2AF1-203ENST00000398137 KAT14Q9H8E8 782 aa29.76■■■□□ 2.35
U2AF1-203ENST00000398137 SENP2Q9HC62 589 aa29.76■■■□□ 2.35
U2AF1-203ENST00000398137 HMGB1P09429 215 aaKnown RBP29.75■■■□□ 2.35
U2AF1-203ENST00000398137 PSMA5P28066 241 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 WTAPQ15007 396 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 SLFN13Q68D06 897 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 BLOC1S2Q6QNY1 142 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 CHRDL2Q6WN34 429 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 DHX32Q7L7V1 743 aaKnown RBP29.75■■■□□ 2.35
U2AF1-203ENST00000398137 DPP9Q86TI2 863 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 RIOX2Q8IUF8 465 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 ABRAQ8N0Z2 381 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 BACH2Q9BYV9 841 aa29.75■■■□□ 2.35
U2AF1-203ENST00000398137 SH2B2O14492 632 aaPredicted RBP29.74■■■□□ 2.35
U2AF1-203ENST00000398137 COL6A1P12109 1028 aa29.74■■■□□ 2.35
U2AF1-203ENST00000398137 CYBAP13498 195 aa29.74■■■□□ 2.35
U2AF1-203ENST00000398137 ANAPC15P60006 121 aa29.74■■■□□ 2.35
U2AF1-203ENST00000398137 OLFML2BQ68BL8 750 aa29.74■■■□□ 2.35
U2AF1-203ENST00000398137 IGDCC4Q8TDY8 1250 aa29.74■■■□□ 2.35
U2AF1-203ENST00000398137 TMEM87BQ96K49 555 aa29.74■■■□□ 2.35
U2AF1-203ENST00000398137 C11orf49Q9H6J7 331 aa29.74■■■□□ 2.35
U2AF1-203ENST00000398137 UPF2Q9HAU5 1272 aaKnown RBP29.74■■■□□ 2.35
U2AF1-203ENST00000398137 WDR19Q8NEZ3 1342 aa29.73■■■□□ 2.35
U2AF1-203ENST00000398137 EVI5O60447 810 aa29.73■■■□□ 2.35
U2AF1-203ENST00000398137 EXOSC10Q01780 885 aaKnown RBP29.73■■■□□ 2.35
U2AF1-203ENST00000398137 PNMA1Q8ND90 353 aa29.73■■■□□ 2.35
U2AF1-203ENST00000398137 SLF1Q9BQI6 1058 aa29.73■■■□□ 2.35
U2AF1-203ENST00000398137 LY9Q9HBG7 655 aa29.73■■■□□ 2.35
U2AF1-203ENST00000398137 ISY1Q9ULR0 285 aaKnown RBP29.73■■■□□ 2.35
U2AF1-203ENST00000398137 NR2E3Q9Y5X4 410 aa29.73■■■□□ 2.35
U2AF1-203ENST00000398137 PLXNA1Q9UIW2 1896 aa29.73■■■□□ 2.35
U2AF1-203ENST00000398137 SLC25A27O95847 323 aa29.72■■■□□ 2.35
U2AF1-203ENST00000398137 STAT3P40763 770 aa29.72■■■□□ 2.35
U2AF1-203ENST00000398137 FXR1P51114 621 aaKnown RBP eCLIP29.72■■■□□ 2.35
U2AF1-203ENST00000398137 MTA3Q9BTC8 594 aa29.72■■■□□ 2.35
U2AF1-203ENST00000398137 RBM27Q9P2N5 1060 aaKnown RBP29.72■■■□□ 2.35
U2AF1-203ENST00000398137 RPS6KB1P23443 525 aa29.71■■■□□ 2.35
U2AF1-203ENST00000398137 GMCL1Q96IK5 515 aa29.71■■■□□ 2.35
U2AF1-203ENST00000398137 MAML3Q96JK9 1138 aa29.71■■■□□ 2.35
U2AF1-203ENST00000398137 C22orf23Q9BZE7 217 aa29.71■■■□□ 2.35
U2AF1-203ENST00000398137 UPF3BQ9BZI7 483 aaKnown RBP29.71■■■□□ 2.35
U2AF1-203ENST00000398137 DDX20Q9UHI6 824 aaKnown RBP29.71■■■□□ 2.35
U2AF1-203ENST00000398137 TRIOBPQ9H2D6 2365 aa29.71■■■□□ 2.35
U2AF1-203ENST00000398137 FCER1AP12319 257 aa29.7■■■□□ 2.35
U2AF1-203ENST00000398137 SLC1A4P43007 532 aa29.7■■■□□ 2.35
U2AF1-203ENST00000398137 CCDC96Q2M329 555 aa29.7■■■□□ 2.35
U2AF1-203ENST00000398137 TM6SF1Q9BZW5 370 aa29.7■■■□□ 2.35
U2AF1-203ENST00000398137 ZSWIM6Q9HCJ5 1215 aa29.7■■■□□ 2.35
U2AF1-203ENST00000398137 RIPK3Q9Y572 518 aa29.7■■■□□ 2.35
U2AF1-203ENST00000398137 DCAF4Q8WV16 495 aa29.69■■■□□ 2.34
U2AF1-203ENST00000398137 CYP46A1Q9Y6A2 500 aa29.69■■■□□ 2.34
U2AF1-203ENST00000398137 PGK2P07205 417 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 PDHBP11177 359 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 BMP3P12645 472 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 PRAMEF19Q5SWL8 479 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 NFXL1Q6ZNB6 911 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 RUFY3Q7L099 469 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 PRPF38AQ8NAV1 312 aaKnown RBP29.68■■■□□ 2.34
U2AF1-203ENST00000398137 IL17RAQ96F46 866 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 MMP19Q99542 508 aa29.68■■■□□ 2.34
U2AF1-203ENST00000398137 FRMPD2Q68DX3 1309 aaPredicted RBP29.68■■■□□ 2.34
U2AF1-203ENST00000398137 CNGA1P29973 690 aa29.67■■■□□ 2.34
U2AF1-203ENST00000398137 FGD1P98174 961 aa29.67■■■□□ 2.34
U2AF1-203ENST00000398137 KCTD1Q719H9 257 aa29.67■■■□□ 2.34
U2AF1-203ENST00000398137 C7orf61Q8IZ16 206 aa29.67■■■□□ 2.34
U2AF1-203ENST00000398137 DNAH12Q6ZR08 3092 aa29.66■■■□□ 2.34
U2AF1-203ENST00000398137 LIFRP42702 1097 aa29.66■■■□□ 2.34
U2AF1-203ENST00000398137 RBM25P49756 843 aaKnown RBP29.66■■■□□ 2.34
U2AF1-203ENST00000398137 ZNF792Q3KQV3 632 aa29.66■■■□□ 2.34
U2AF1-203ENST00000398137 Q6ZUG5 572 aa29.66■■■□□ 2.34
U2AF1-203ENST00000398137 PCDH10Q9P2E7 1040 aa29.66■■■□□ 2.34
U2AF1-203ENST00000398137 SMCHD1A6NHR9 2005 aa29.66■■■□□ 2.34
U2AF1-203ENST00000398137 SZT2Q5T011 3432 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 CCDC69A6NI79 296 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 ATP2A1O14983 1001 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 SNHG28P0DPA3 235 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 ZNF654Q8IZM8 581 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 MYL10Q9BUA6 226 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 TEX13BQ9BXU2 312 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 SLC38A10Q9HBR0 1119 aa29.65■■■□□ 2.34
U2AF1-203ENST00000398137 TMEM232C9JQI7 657 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 MSCO60682 206 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 ZNF543Q08ER8 600 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 IKQ13123 557 aaPredicted RBP29.64■■■□□ 2.34
U2AF1-203ENST00000398137 LRRC26Q2I0M4 334 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 SNRNP48Q6IEG0 339 aaKnown RBP29.64■■■□□ 2.34
U2AF1-203ENST00000398137 CATIPQ7Z7H3 387 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 TMTC2Q8N394 836 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 KIFC2Q96AC6 838 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 GPCPD1Q9NPB8 672 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 SLC5A4Q9NY91 659 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 FEM1BQ9UK73 627 aa29.64■■■□□ 2.34
U2AF1-203ENST00000398137 GOLGA8HP0CJ92 632 aa29.63■■■□□ 2.33
U2AF1-203ENST00000398137 ANO1Q5XXA6 986 aa29.63■■■□□ 2.33
U2AF1-203ENST00000398137 SGMS1Q86VZ5 419 aa29.63■■■□□ 2.33
U2AF1-203ENST00000398137 RAB11FIP4Q86YS3 637 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms