RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
LSS-202ENST00000397728 CCDC186Q7Z3E2 898 aa17.15■□□□□ 0.34
LSS-202ENST00000397728 ATP6V0A1Q93050 837 aa17.15■□□□□ 0.34
LSS-202ENST00000397728 CDHR1Q96JP9 859 aa17.15■□□□□ 0.34
LSS-202ENST00000397728 PLEKHA8P1O95397 391 aa17.15■□□□□ 0.34
LSS-202ENST00000397728 FAM193AP78312 1265 aa17.15■□□□□ 0.34
LSS-202ENST00000397728 NR5A1Q13285 461 aa17.15■□□□□ 0.34
LSS-202ENST00000397728 SNRNP48Q6IEG0 339 aaKnown RBP17.15■□□□□ 0.34
LSS-202ENST00000397728 SLC8A3P57103 927 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 NEDD4P46934 1319 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 RGS12O14924 1447 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 PLSCR1O15162 318 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 HMGCS2P54868 508 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 TGFB2P61812 414 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 TICAM2Q86XR7 235 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
LSS-202ENST00000397728 KDM6AO15550 1401 aaPredicted RBP17.14■□□□□ 0.33
LSS-202ENST00000397728 DCAF4Q8WV16 495 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 FERMT1Q9BQL6 677 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 hCG_1984214I3L0E3 225 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 SRGNP10124 158 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 AKR1B1P15121 316 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 TNNI1P19237 187 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 CCND2P30279 289 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 GNG11P61952 73 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 TAX1BP1Q86VP1 789 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 FAM178BQ8IXR5 827 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 ZNF713Q8N859 430 aaPredicted RBP17.14■□□□□ 0.33
LSS-202ENST00000397728 ADPGKQ9BRR6 497 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 KIAA1024Q9UPX6 916 aa17.14■□□□□ 0.33
LSS-202ENST00000397728 GADD45BO75293 160 aaPredicted RBP17.13■□□□□ 0.33
LSS-202ENST00000397728 NT5C2P49902 561 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 ADALQ6DHV7 355 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 CLSTN2Q9H4D0 955 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 ZNF70Q9UC06 446 aaPredicted RBP17.13■□□□□ 0.33
LSS-202ENST00000397728 PCDHB13Q9Y5F0 798 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 PFKFB1P16118 471 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 PLCD3Q8N3E9 789 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 MLKLQ8NB16 471 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 IWS1Q96ST2 819 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.13■□□□□ 0.339e-16■■□□□ 12.5
LSS-202ENST00000397728 BCL9O00512 1426 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 HOOK3Q86VS8 718 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 ZFP91Q96JP5 570 aaPredicted RBP17.13■□□□□ 0.33
LSS-202ENST00000397728 PLVAPQ9BX97 442 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 OSBPL5Q9H0X9 879 aaPredicted RBP17.13■□□□□ 0.33
LSS-202ENST00000397728 SYNRGQ9UMZ2 1314 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 SLC7A3Q8WY07 619 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
LSS-202ENST00000397728 STX10O60499 249 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 LIG4P49917 911 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 FOXP1Q9H334 677 aaPredicted RBP17.12■□□□□ 0.33
LSS-202ENST00000397728 PXDNQ92626 1479 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 PRPF3O43395 683 aaKnown RBP17.12■□□□□ 0.33
LSS-202ENST00000397728 SKILP12757 684 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 FBXO40Q9UH90 709 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 RABGAP1Q9Y3P9 1069 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 TMEM110-MUSTN1A8MSY1 372 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 K7ENM7 598 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 CYP2J2P51589 502 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 FBXO33Q7Z6M2 555 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 WDR11Q9BZH6 1224 aa17.12■□□□□ 0.33
LSS-202ENST00000397728 ZNF157P51786 506 aaPredicted RBP17.11■□□□□ 0.33
LSS-202ENST00000397728 ENAHQ8N8S7 591 aaPredicted RBP17.11■□□□□ 0.33
LSS-202ENST00000397728 C3P01024 1663 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 GOLGA6L9A6NEM1 432 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 GCFC2P16383 781 aaKnown RBP17.11■□□□□ 0.33
LSS-202ENST00000397728 KLRK1P26718 216 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
LSS-202ENST00000397728 RCSD1Q6JBY9 416 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 RNF146Q9NTX7 359 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 PRKAG2Q9UGJ0 569 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 AKT3Q9Y243 479 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 ABCC12Q96J65 1359 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 CD19P15391 556 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 PNOCQ13519 176 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 HHIPL2Q6UWX4 724 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 DEFB129Q9H1M3 183 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
LSS-202ENST00000397728 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
LSS-202ENST00000397728 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
LSS-202ENST00000397728 RMDN3Q96TC7 470 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 LPXNO60711 386 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 HUNKP57058 714 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
LSS-202ENST00000397728 SLC10A5Q5PT55 438 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 CYB5R4Q7L1T6 521 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 EHBP1Q8NDI1 1231 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 POLLQ9UGP5 575 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
LSS-202ENST00000397728 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
LSS-202ENST00000397728 SNW1Q13573 536 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms