RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 PCSK9Q8NBP7 692 aaKnown RBP14.23□□□□□ -0.13
SYNE4-203ENST00000397428 KIFC2Q96AC6 838 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 KATNBL1Q9H079 304 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 PRUNE2Q8WUY3 3088 aa14.23□□□□□ -0.13
SYNE4-203ENST00000397428 APPP05067 770 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 ASGR1P07306 291 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 BMP3P12645 472 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 TDO2P48775 406 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 TFAP4Q01664 338 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 GNASQ5JWF2 1037 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 SLFN13Q68D06 897 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 GPATCH3Q96I76 525 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 GLT1D1Q96MS3 346 aa14.22□□□□□ -0.13
SYNE4-203ENST00000397428 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
SYNE4-203ENST00000397428 CTDP1Q9Y5B0 961 aaPredicted RBP14.22□□□□□ -0.13
SYNE4-203ENST00000397428 CUL9Q8IWT3 2517 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 ARVCFO00192 962 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 PLA2G6O60733 806 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 C6orf222P0C671 652 aaPredicted RBP14.21□□□□□ -0.13
SYNE4-203ENST00000397428 CNTN2Q02246 1040 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 GRIN2CQ14957 1233 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 RASIP1Q5U651 963 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 TSHZ3Q63HK5 1081 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 CCDC144CPQ8IYA2 1237 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 CHURC1Q8WUH1 139 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 STAG1Q8WVM7 1258 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 GMCL1Q96IK5 515 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 SEC62Q99442 399 aaKnown RBP14.21□□□□□ -0.13
SYNE4-203ENST00000397428 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.21□□□□□ -0.137e-6■□□□□ 9.4
SYNE4-203ENST00000397428 SPC25Q9HBM1 224 aa14.21□□□□□ -0.13
SYNE4-203ENST00000397428 MYH4Q9Y623 1939 aa14.21□□□□□ -0.14
SYNE4-203ENST00000397428 ZNF536O15090 1300 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 MROH7Q68CQ1 1323 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 TTC41PQ6P2S7 1318 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 SOWAHBA6NEL2 793 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 TMEM232C9JQI7 657 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 CD4P01730 458 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 PDE4BQ07343 736 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 LRRFIP1Q32MZ4 808 aaKnown RBP14.2□□□□□ -0.14
SYNE4-203ENST00000397428 TMEM240Q5SV17 173 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 LRRC47Q8N1G4 583 aaKnown RBP14.2□□□□□ -0.14
SYNE4-203ENST00000397428 SLC43A3Q8NBI5 491 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 NACAP1Q9BZK3 213 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 PLIN4Q96Q06 1357 aa14.2□□□□□ -0.14
SYNE4-203ENST00000397428 TSPY3P0CV98 308 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 TSPY8P0CW00 308 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 FOSL2P15408 326 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 DNAJB2P25686 324 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 NOVP48745 357 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 PPARAQ07869 468 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 TKFCQ3LXA3 575 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 RCSD1Q6JBY9 416 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 FAM160B2Q86V87 743 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 FAM126BQ8IXS8 530 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 PI4K2BQ8TCG2 481 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 VTI1AQ96AJ9 217 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 AGBL1Q96MI9 1066 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 ZNF576Q9H609 170 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 A1CFQ9NQ94 594 aaKnown RBP14.19□□□□□ -0.14
SYNE4-203ENST00000397428 IL17RBQ9NRM6 502 aa14.19□□□□□ -0.14
SYNE4-203ENST00000397428 GNEQ9Y223 722 aaKnown RBP14.19□□□□□ -0.14
SYNE4-203ENST00000397428 ASTN1O14525 1302 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 A0A0U1RQG5 324 aaPredicted RBP14.18□□□□□ -0.14
SYNE4-203ENST00000397428 ASB14A6NK59 587 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 SLC3A2P08195 630 aaKnown RBP14.18□□□□□ -0.14
SYNE4-203ENST00000397428 MCCP23508 829 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 STAT2P52630 851 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 TNFAIP2Q03169 654 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 PPIGQ13427 754 aaKnown RBP eCLIP14.18□□□□□ -0.146e-8■□□□□ 9.1
SYNE4-203ENST00000397428 IQSEC1Q6DN90 963 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 TMEM199Q8N511 208 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 ACAD9Q9H845 621 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 INCENPQ9NQS7 918 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
SYNE4-203ENST00000397428 CHD9Q3L8U1 2897 aa14.18□□□□□ -0.14
SYNE4-203ENST00000397428 GRIN2DO15399 1336 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 MCM3APO60318 1980 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.17□□□□□ -0.14
SYNE4-203ENST00000397428 FOXP2O15409 715 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 CSF2RAP15509 400 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 PPP4R3BQ5MIZ7 849 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 TAPT1Q6NXT6 567 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 CCDC174Q6PII3 467 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 ZNF365Q70YC5 407 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 TIFAQ96CG3 184 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 TRERF1Q96PN7 1200 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 SEZ6LQ9BYH1 1024 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 NAPBQ9H115 298 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 Q9Y3F1 56 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 PCDHB15Q9Y5E8 787 aa14.17□□□□□ -0.14
SYNE4-203ENST00000397428 ERC2O15083 957 aa14.16□□□□□ -0.14
SYNE4-203ENST00000397428 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
SYNE4-203ENST00000397428 CABYRO75952 493 aa14.16□□□□□ -0.14
SYNE4-203ENST00000397428 FGRP09769 529 aa14.16□□□□□ -0.14
SYNE4-203ENST00000397428 SLC1A4P43007 532 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms