RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CNPY2Q9Y2B0 182 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 TCHHQ07283 1943 aa21.8■■□□□ 1.08
TSPAN4-204ENST00000397404 M0R2N6 131 aa21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 PRPF40AO75400 957 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 KLHL40Q2TBA0 621 aa21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 REXO1Q8N1G1 1221 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 LEO1Q8WVC0 666 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 TNFRSF25Q93038 417 aa21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 NUP88Q99567 741 aaPredicted RBP21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 EMILIN3Q9NT22 766 aa21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 PCDHA1Q9Y5I3 950 aa21.79■■□□□ 1.08
TSPAN4-204ENST00000397404 CCDC194A0A1B0GVG4 234 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 GOLGA6L4A6NEF3 574 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 FIBPO43427 364 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 OAZ1P54368 228 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 ANO1Q5XXA6 986 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 PIBF1Q8WXW3 757 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 CPVLQ9H3G5 476 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 KCNH4Q9UQ05 1017 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 OTOFQ9HC10 1997 aa21.78■■□□□ 1.08
TSPAN4-204ENST00000397404 TRIM75PA6NK02 468 aa21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 PPP6R2O75170 966 aa21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 ZYXQ15942 572 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 KIAA1755Q5JYT7 1200 aa21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 USP28Q96RU2 1077 aa21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 NAP1L4Q99733 375 aaKnown RBP21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 HOXC10Q9NYD6 342 aa21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 PPP1R9AQ9ULJ8 1098 aa21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 ABCB11O95342 1321 aa21.77■■□□□ 1.08
TSPAN4-204ENST00000397404 USP17L15C9J2P7 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L13C9JLJ4 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L11C9JVI0 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L18D6R9N7 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L22D6RA61 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L17D6RBQ6 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L19D6RCP7 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L20D6RJB6 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 FOSP01100 380 aaPredicted RBP21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 USP17L24Q0WX57 530 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 NR5A1Q13285 461 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 PABPC4Q13310 644 aaKnown RBP eCLIP21.77■■□□□ 1.073e-8■■■■■ 35.6
TSPAN4-204ENST00000397404 AP3B2Q13367 1082 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 SLC39A14Q15043 492 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 STK38Q15208 465 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 FOXD4L6Q3SYB3 417 aaPredicted RBP21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 CHADLQ6NUI6 762 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 FOXD4L3Q6VB84 417 aaPredicted RBP21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 C2orf69Q8N8R5 385 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 LINC00301Q8NCQ3 95 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 SHISA4Q96DD7 197 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 TANGO6Q9C0B7 1094 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 RPAP3Q9H6T3 665 aaPredicted RBP21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 PSTPIP2Q9H939 334 aa21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 MAP3K20Q9NYL2 800 aaKnown RBP21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 MRPL11Q9Y3B7 192 aaKnown RBP21.77■■□□□ 1.07
TSPAN4-204ENST00000397404 ZBED4O75132 1171 aa21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 PRKG1Q13976 671 aa21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 MAP1SQ66K74 1059 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 TYW1BQ6NUM6 668 aa21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 FASTKD5Q7L8L6 764 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 KIFC2Q96AC6 838 aa21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 CTDP1Q9Y5B0 961 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 DDX49Q9Y6V7 483 aaKnown RBP21.76■■□□□ 1.07
TSPAN4-204ENST00000397404 A0A0G2JLL6 359 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 PIK3CDO00329 1044 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 TRAK2O60296 914 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 FLOT1O75955 427 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 ICAM1P05362 532 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 HMGCS2P54868 508 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 COG2Q14746 738 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 NONOQ15233 471 aaKnown RBP eCLIP21.75■■□□□ 1.079e-6■■■□□ 19
TSPAN4-204ENST00000397404 SF3A1Q15459 793 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 FAM173BQ6P4H8 233 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 PRRT2Q7Z6L0 340 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 OXER1Q8TDS5 423 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 SLC38A10Q9HBR0 1119 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 PCDHA6Q9UN73 950 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 PCDHA8Q9Y5H6 950 aa21.75■■□□□ 1.07
TSPAN4-204ENST00000397404 LAD1O00515 517 aa21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 SPTLC2O15270 562 aa21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 HOXA7P31268 230 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 CATSPERGQ6ZRH7 1159 aa21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 CCDC84Q86UT8 332 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 MB21D1Q8N884 522 aa21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 SLC10A4Q96EP9 437 aa21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 GBA2Q9HCG7 927 aaPredicted RBP21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 TFIP11Q9UBB9 837 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-204ENST00000397404 ATP2A1O14983 1001 aa21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 PPP1R11O60927 126 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 CLK2P49760 499 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 ADALQ6DHV7 355 aa21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 MCF2L2Q86YR7 1114 aa21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 COA7Q96BR5 231 aa21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 ELP3Q9H9T3 547 aa21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 ADAMTS5Q9UNA0 930 aa21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 LOC285556D6RIA3 1793 aa21.73■■□□□ 1.07
TSPAN4-204ENST00000397404 A0A1W2PQ27 194 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms