RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 MYSM1Q5VVJ2 828 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 FBXO11Q86XK2 927 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 BLIDQ8IZY5 108 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 OPTNQ96CV9 577 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 ZNF396Q96N95 335 aaPredicted RBP14.56□□□□□ -0.08
LMCD1-202ENST00000397386 SCAND2PQ9GZW5 306 aaPredicted RBP14.56□□□□□ -0.08
LMCD1-202ENST00000397386 PPP1R9AQ9ULJ8 1098 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 PCDHA1Q9Y5I3 950 aa14.56□□□□□ -0.08
LMCD1-202ENST00000397386 PTPRFP10586 1907 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 SMCO2A6NFE2 343 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L15C9J2P7 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L13C9JLJ4 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L11C9JVI0 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L18D6R9N7 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L22D6RA61 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L17D6RBQ6 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L19D6RCP7 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L20D6RJB6 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 M0R2N6 131 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 DNM1Q05193 864 aaKnown RBP14.55□□□□□ -0.08
LMCD1-202ENST00000397386 USP17L24Q0WX57 530 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 COG2Q14746 738 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 CSPP1Q1MSJ5 1256 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 CATSPERGQ6ZRH7 1159 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 TNFRSF25Q93038 417 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 FBXO28Q9NVF7 368 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 ADAMTS5Q9UNA0 930 aa14.55□□□□□ -0.08
LMCD1-202ENST00000397386 KIF3CO14782 793 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 FLOT1O75955 427 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 HOXA7P31268 230 aaPredicted RBP14.54□□□□□ -0.08
LMCD1-202ENST00000397386 NR5A1Q13285 461 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 RILPL1Q5EBL4 403 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 CST9Q5W186 159 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 FASTKD5Q7L8L6 764 aaKnown RBP14.54□□□□□ -0.08
LMCD1-202ENST00000397386 TMEM87AQ8NBN3 555 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 OXER1Q8TDS5 423 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 COA7Q96BR5 231 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 SLC38A10Q9HBR0 1119 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 RIC8AQ9NPQ8 531 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 HOXC10Q9NYD6 342 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 PASKQ96RG2 1323 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 TRPM7Q96QT4 1865 aa14.54□□□□□ -0.08
LMCD1-202ENST00000397386 LOC285556D6RIA3 1793 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 ICAM1P05362 532 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 ZBTB48P10074 688 aaPredicted RBP14.53□□□□□ -0.08
LMCD1-202ENST00000397386 TRAPPC10P48553 1259 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 ADCY7P51828 1080 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 MRPL12P52815 198 aaKnown RBP14.53□□□□□ -0.08
LMCD1-202ENST00000397386 OAZ1P54368 228 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 SNAPC2Q13487 334 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 DGKZQ13574 1117 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 FAM173BQ6P4H8 233 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 SMC1BQ8NDV3 1235 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 CUL5Q93034 780 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 POLR3EQ9NVU0 708 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 ELP1O95163 1332 aa14.53□□□□□ -0.08
LMCD1-202ENST00000397386 VWA5AO00534 786 aa14.52□□□□□ -0.08
LMCD1-202ENST00000397386 DSG3P32926 999 aa14.52□□□□□ -0.08
LMCD1-202ENST00000397386 REXO1Q8N1G1 1221 aaKnown RBP14.52□□□□□ -0.08
LMCD1-202ENST00000397386 PSTPIP2Q9H939 334 aa14.52□□□□□ -0.08
LMCD1-202ENST00000397386 RTEL1Q9NZ71 1219 aa14.52□□□□□ -0.08
LMCD1-202ENST00000397386 AGTPBP1Q9UPW5 1226 aa14.52□□□□□ -0.08
LMCD1-202ENST00000397386 PARP14Q460N5 1801 aa14.52□□□□□ -0.08
LMCD1-202ENST00000397386 MYH15Q9Y2K3 1946 aa14.52□□□□□ -0.09
LMCD1-202ENST00000397386 ATP2A1O14983 1001 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 ZBED4O75132 1171 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 NCLP19338 710 aaKnown RBP14.51□□□□□ -0.09
LMCD1-202ENST00000397386 NASPP49321 788 aaPredicted RBP14.51□□□□□ -0.09
LMCD1-202ENST00000397386 PABPC4Q13310 644 aaKnown RBP eCLIP14.51□□□□□ -0.09
LMCD1-202ENST00000397386 FOXD4L6Q3SYB3 417 aaPredicted RBP14.51□□□□□ -0.09
LMCD1-202ENST00000397386 FOXD4L3Q6VB84 417 aaPredicted RBP14.51□□□□□ -0.09
LMCD1-202ENST00000397386 KRT25Q7Z3Z0 450 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 NOL7Q9UMY1 257 aaKnown RBP14.51□□□□□ -0.09
LMCD1-202ENST00000397386 PCDHA6Q9UN73 950 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 CNPY2Q9Y2B0 182 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 PCDHA8Q9Y5H6 950 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 ZNF536O15090 1300 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 ABCB11O95342 1321 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 TCHHQ07283 1943 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 RLFQ13129 1914 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 CCDC194A0A1B0GVG4 234 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 TOMM70O94826 608 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 YEATS4O95619 227 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 GJA5P36382 358 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 GTF2A2P52657 109 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 MOGSQ13724 837 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 LBX2Q6XYB7 198 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 SAMD3Q8N6K7 520 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 MB21D1Q8N884 522 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 WNK4Q96J92 1243 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 CHAMP1Q96JM3 812 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 SPATA32Q96LK8 384 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 MAF1Q9H063 256 aa14.51□□□□□ -0.09
LMCD1-202ENST00000397386 TFIP11Q9UBB9 837 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms