RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 TSPY3P0CV98 308 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 TSPY8P0CW00 308 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 MAGEA1P43355 309 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 C8orf74Q6P047 294 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 LACRTQ9GZZ8 138 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 TACC3Q9Y6A5 838 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 XDHP47989 1333 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 EIF6P56537 245 aaKnown RBP16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 IRX3P78415 501 aaPredicted RBP16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 SUSD4Q5VX71 490 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 SPTY2D1Q68D10 685 aaPredicted RBP16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 MB21D1Q8N884 522 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 MROH5Q6ZUA9 1318 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 GOLGA6L10A6NI86 522 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 TRIM14Q14142 442 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 LRRC41Q15345 812 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 EZH2Q15910 746 aaKnown RBP16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 ZNF658Q5TYW1 1059 aaPredicted RBP16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 CNOT6LQ96LI5 555 aaKnown RBP16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 MED4Q9NPJ6 270 aa16.42■□□□□ 0.22
RAPGEF4-201ENST00000397081 H7C1D1 291 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 SARSP49591 514 aaKnown RBP16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 ZNF579Q8NAF0 562 aaKnown RBP16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 FAM53CQ9NYF3 392 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 RWDD2AQ9UIY3 292 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 PLEKP08567 350 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 BLIDQ8IZY5 108 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 PPM1EQ8WY54 764 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 CLSTN1O94985 981 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 RASSF7Q02833 373 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 SRBD1Q8N5C6 995 aaKnown RBP16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
RAPGEF4-201ENST00000397081 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 COL5A2P05997 1499 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 ERLIN2O94905 339 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 PMS1P54277 932 aaKnown RBP16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 PDCLQ13371 301 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 ADGRA1Q86SQ6 560 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 SH2D3CQ8N5H7 860 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 DYNLL2Q96FJ2 89 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 RBM28Q9NW13 759 aaKnown RBP16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 JRKLQ9Y4A0 524 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 WDR19Q8NEZ3 1342 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 NFRKBQ6P4R8 1299 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 PROCA1Q8NCQ7 364 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 CAPS2Q9BXY5 557 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 SEPT11Q9NVA2 429 aaKnown RBP16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 CSF1RP07333 972 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 ARID4AP29374 1257 aaPredicted RBP16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 TUBB2AQ13885 445 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 TCERG1LQ5VWI1 586 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 LRRC31Q6UY01 552 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 NELFCDQ8IXH7 590 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 CALML4Q96GE6 196 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 TUBB2BQ9BVA1 445 aa16.4■□□□□ 0.22
RAPGEF4-201ENST00000397081 USP14P54578 494 aa16.39■□□□□ 0.22
RAPGEF4-201ENST00000397081 PRPF4BQ13523 1007 aaKnown RBP16.39■□□□□ 0.22
RAPGEF4-201ENST00000397081 CFAP58Q5T655 872 aa16.39■□□□□ 0.22
RAPGEF4-201ENST00000397081 CABP7Q86V35 215 aa16.39■□□□□ 0.22
RAPGEF4-201ENST00000397081 OTUD6BQ8N6M0 293 aa16.39■□□□□ 0.22
RAPGEF4-201ENST00000397081 CALM1P0DP23 149 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 CALM2P0DP24 149 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 CALM3P0DP25 149 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 FCER1AP12319 257 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 TAF4BQ92750 862 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 VAV2P52735 878 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 MUM1L1Q5H9M0 696 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 CALML3P27482 149 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 INPP5BP32019 993 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 DNM2P50570 870 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 FBXL16Q8N461 479 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
RAPGEF4-201ENST00000397081 SMIM23A6NLE4 172 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 USP17L8P0C7I0 530 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 RAPGEF1Q13905 1077 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 RRP36Q96EU6 259 aaKnown RBP16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 TRIM31Q9BZY9 425 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 USP17L3A6NCW0 530 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 USP17L4A6NCW7 530 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 TUBBP07437 444 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 GUCY2DQ02846 1103 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 USP17L1Q7RTZ2 530 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 PPANQ9NQ55 473 aaKnown RBP16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 PACSIN2Q9UNF0 486 aaPredicted RBP16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 CAPN7Q9Y6W3 813 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 MAP2K7O14733 419 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 PRPF3O43395 683 aaKnown RBP16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 FTCDO95954 541 aa16.38■□□□□ 0.21
RAPGEF4-201ENST00000397081 TRMT1LQ7Z2T5 733 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms