RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 BARHL2Q9NY43 387 aa16.25■□□□□ 0.19
GAPDH-203ENST00000396858 CCL15-CCL14A0A0B4J2E2 113 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 SPDYE16A6NNV3 312 aaPredicted RBP16.24■□□□□ 0.19
GAPDH-203ENST00000396858 F13A1P00488 732 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 MMP1P03956 469 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 GTF2A2P52657 109 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 RESTQ13127 1097 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 CCL15Q16663 113 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 USH1GQ495M9 461 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 MCTP1Q6DN14 999 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 CATSPERGQ6ZRH7 1159 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 CCDC148Q8NFR7 591 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 MS4A4AQ96JQ5 239 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 PHF20Q9BVI0 1012 aa16.24■□□□□ 0.19
GAPDH-203ENST00000396858 KIF28PB7ZC32 967 aa16.23■□□□□ 0.19
GAPDH-203ENST00000396858 hCG_1984214I3L0E3 225 aa16.23■□□□□ 0.19
GAPDH-203ENST00000396858 CETPP11597 493 aa16.23■□□□□ 0.19
GAPDH-203ENST00000396858 XBP1P17861 261 aa16.23■□□□□ 0.19
GAPDH-203ENST00000396858 IRX3P78415 501 aaPredicted RBP16.23■□□□□ 0.19
GAPDH-203ENST00000396858 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
GAPDH-203ENST00000396858 GPAT2Q6NUI2 795 aa16.23■□□□□ 0.19
GAPDH-203ENST00000396858 PPP1R18Q6NYC8 613 aa16.23■□□□□ 0.19
GAPDH-203ENST00000396858 FASTKD5Q7L8L6 764 aaKnown RBP16.23■□□□□ 0.19
GAPDH-203ENST00000396858 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
GAPDH-203ENST00000396858 DIS3L2Q8IYB7 885 aaKnown RBP16.23■□□□□ 0.19
GAPDH-203ENST00000396858 ZNF713Q8N859 430 aaPredicted RBP16.23■□□□□ 0.19
GAPDH-203ENST00000396858 PRPF38AQ8NAV1 312 aaKnown RBP16.23■□□□□ 0.19
GAPDH-203ENST00000396858 ADAMTS3O15072 1205 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 DSG3P32926 999 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 NLRP5P59047 1200 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 NPY5RQ15761 445 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
GAPDH-203ENST00000396858 OXER1Q8TDS5 423 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 AMNQ9BXJ7 453 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
GAPDH-203ENST00000396858 SLC38A10Q9HBR0 1119 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
GAPDH-203ENST00000396858 RBBP6Q7Z6E9 1792 aaKnown RBP16.22■□□□□ 0.19
GAPDH-203ENST00000396858 COL11A1P12107 1806 aaPredicted RBP16.22■□□□□ 0.19
GAPDH-203ENST00000396858 ZNF536O15090 1300 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 MYPNQ86TC9 1320 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 BTBD19C9JJ37 291 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 VWA5AO00534 786 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 KRT2P35908 639 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 GRM1Q13255 1194 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 FOXD4L6Q3SYB3 417 aaPredicted RBP16.21■□□□□ 0.19
GAPDH-203ENST00000396858 FOXD4L3Q6VB84 417 aaPredicted RBP16.21■□□□□ 0.19
GAPDH-203ENST00000396858 REPS2Q8NFH8 660 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.19
GAPDH-203ENST00000396858 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 RAVER2Q9HCJ3 691 aaKnown RBP16.21■□□□□ 0.19
GAPDH-203ENST00000396858 CCPG1Q9ULG6 757 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 CTDP1Q9Y5B0 961 aaPredicted RBP16.21■□□□□ 0.19
GAPDH-203ENST00000396858 PCDHA1Q9Y5I3 950 aa16.21■□□□□ 0.19
GAPDH-203ENST00000396858 FAM155AB1AL88 458 aaPredicted RBP16.2■□□□□ 0.18
GAPDH-203ENST00000396858 ZBED4O75132 1171 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 ICAM1P05362 532 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 HOXA7P31268 230 aaPredicted RBP16.2■□□□□ 0.18
GAPDH-203ENST00000396858 ADCY7P51828 1080 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 NR5A1Q13285 461 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 GNL2Q13823 731 aaKnown RBP16.2■□□□□ 0.18
GAPDH-203ENST00000396858 COG2Q14746 738 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
GAPDH-203ENST00000396858 CPXCR1Q8N123 301 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 RASGRP4Q8TDF6 673 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 TNPO1Q92973 898 aaKnown RBP16.2■□□□□ 0.18
GAPDH-203ENST00000396858 AGBL1Q96MI9 1066 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 BRMS1Q9HCU9 246 aa16.2■□□□□ 0.18
GAPDH-203ENST00000396858 MYH15Q9Y2K3 1946 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 ESYT2A0FGR8 921 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 PDHXO00330 501 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 PEX10O60683 326 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 CALML3P27482 149 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 HERVK_113P62684 666 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 PABPC4Q13310 644 aaKnown RBP eCLIP16.19■□□□□ 0.181e-323■■■■□ 26.1
GAPDH-203ENST00000396858 UBE2SQ16763 222 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 FAM173BQ6P4H8 233 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 ANKRD23Q86SG2 305 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 DAGLBQ8NCG7 672 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 PCDHA4Q9UN74 947 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 ABCB11O95342 1321 aa16.19■□□□□ 0.18
GAPDH-203ENST00000396858 FAM205CA6NFA0 338 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 SMCO2A6NFE2 343 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 MANSC4A6NHS7 340 aaPredicted RBP16.18■□□□□ 0.18
GAPDH-203ENST00000396858 CYP2C8P10632 490 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 PDIA4P13667 645 aaKnown RBP16.18■□□□□ 0.18
GAPDH-203ENST00000396858 OSBPP22059 807 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 APLP1P51693 650 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 TMEM132BQ14DG7 1078 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
GAPDH-203ENST00000396858 SNRNP48Q6IEG0 339 aaKnown RBP16.18■□□□□ 0.18
GAPDH-203ENST00000396858 POTEEQ6S8J3 1075 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 BLIDQ8IZY5 108 aa16.18■□□□□ 0.18
GAPDH-203ENST00000396858 HHIPL1Q96JK4 782 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms