RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 HIPK3Q9H422 1215 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 EPHX3Q9H6B9 360 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 C1orf115Q9H7X2 142 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 ARMT1Q9H993 441 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 MYH4Q9Y623 1939 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 UMODL1Q5DID0 1318 aa10.17□□□□□ -0.78
SCFD1-202ENST00000396629 CYP2D7A0A087X1C5 515 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 KCNQ1P51787 676 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 RABGGTBP53611 331 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 PPP2R2DQ66LE6 453 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 OTOP2Q7RTS6 562 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 VWCEQ96DN2 955 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 SEZ6LQ9BYH1 1024 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 HCN4Q9Y3Q4 1203 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 TRANK1O15050 2925 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 CABYRO75952 493 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 MYOGP15173 224 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 ARMCX2Q7L311 632 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 ERC1Q8IUD2 1116 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 RPUSD2Q8IZ73 545 aaKnown RBP10.16□□□□□ -0.78
SCFD1-202ENST00000396629 MICALL1Q8N3F8 863 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 NOC4LQ9BVI4 516 aaKnown RBP10.16□□□□□ -0.78
SCFD1-202ENST00000396629 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.16□□□□□ -0.78
SCFD1-202ENST00000396629 MTCH2Q9Y6C9 303 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 SLC4A7Q9Y6M7 1214 aa10.16□□□□□ -0.78
SCFD1-202ENST00000396629 ASTN1O14525 1302 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 GRIN2DO15399 1336 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 USP17L12C9JPN9 530 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 USP17L21D6R901 530 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 TLL1O43897 1013 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 BEX3Q00994 111 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 ZKSCAN2Q63HK3 967 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 PRPF38AQ8NAV1 312 aaKnown RBP10.15□□□□□ -0.78
SCFD1-202ENST00000396629 NUP88Q99567 741 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-202ENST00000396629 WNT8AQ9H1J5 351 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 COG5Q9UP83 839 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 ZBED9Q6R2W3 1325 aa10.15□□□□□ -0.78
SCFD1-202ENST00000396629 PRRC2BQ5JSZ5 2229 aaKnown RBP10.15□□□□□ -0.79
SCFD1-202ENST00000396629 SCN5AQ14524 2016 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 GOLIM4O00461 696 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 ZBED4O75132 1171 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 MBD4O95243 580 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 ADD2P35612 726 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 CCL23P55773 120 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 ITGA7Q13683 1181 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 TMEM31Q5JXX7 168 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 CXCL17Q6UXB2 119 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 AMOTL1Q8IY63 956 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 CHST13Q8NET6 341 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 NYAP2Q9P242 653 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 FBXO40Q9UH90 709 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 GNEQ9Y223 722 aaKnown RBP10.14□□□□□ -0.79
SCFD1-202ENST00000396629 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.14□□□□□ -0.79
SCFD1-202ENST00000396629 F5H6K3 240 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 RAD21O60216 631 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 GPR37L1O60883 481 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 TNFAIP2Q03169 654 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 KLRC3Q07444 240 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 CPXCR1Q8N123 301 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 ANKRD35Q8N283 1001 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 AGBL1Q96MI9 1066 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 SLC38A10Q9HBR0 1119 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 EXOC6BQ9Y2D4 811 aa10.14□□□□□ -0.79
SCFD1-202ENST00000396629 RFXAPO00287 272 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 GTPBP6O43824 516 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-202ENST00000396629 B4GALT4O60513 344 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 NDUFB10O96000 172 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 ATP2A2P16615 1042 aaKnown RBP10.13□□□□□ -0.79
SCFD1-202ENST00000396629 OAZ1P54368 228 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 SKIV2LQ15477 1246 aaKnown RBP10.13□□□□□ -0.79
SCFD1-202ENST00000396629 SLFNL1Q499Z3 407 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 CTR9Q6PD62 1173 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
SCFD1-202ENST00000396629 TRPV6Q9H1D0 765 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 RAVER2Q9HCJ3 691 aaKnown RBP10.13□□□□□ -0.79
SCFD1-202ENST00000396629 C11orf16Q9NQ32 467 aa10.13□□□□□ -0.79
SCFD1-202ENST00000396629 PFKMP08237 780 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 SLC4A3P48751 1232 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 FSCN1Q16658 493 aaKnown RBP10.12□□□□□ -0.79
SCFD1-202ENST00000396629 TMEM67Q5HYA8 995 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 TLK2Q86UE8 772 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 FAM133AQ8N9E0 248 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 RHPN1Q8TCX5 695 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 IL1RAPL2Q9NP60 686 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 EPOPA6NHQ4 379 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 ZBBXA8MT70 800 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 ZEB2O60315 1214 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 ATXN8OSP0DMR3 200 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 RASA1P20936 1047 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 CNTN2Q02246 1040 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 TTLL4Q14679 1199 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 HSP90AB4PQ58FF6 505 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.791e-7■■■□□ 15
SCFD1-202ENST00000396629 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 SCLYQ96I15 445 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 PAG1Q9NWQ8 432 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 FEM1BQ9UK73 627 aa10.12□□□□□ -0.79
SCFD1-202ENST00000396629 Q9Y3F1 56 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms