RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 PLSCR1O15162 318 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 TBC1D8O95759 1140 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 KLK7P49862 253 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
NDE1-201ENST00000396354 MORC3Q14149 939 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 SYCP1Q15431 976 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 LONRF2Q1L5Z9 754 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 CCDC178Q5BJE1 867 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 CAGE1Q8TC20 777 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 TIGD1Q96MW7 591 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
NDE1-201ENST00000396354 BRMS1Q9HCU9 246 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 LTBP1Q14766 1721 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
NDE1-201ENST00000396354 FAM237AA0A1B0GTK4 181 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 EFCAB8A8MWE9 144 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 KRT31Q15323 416 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 C10orf67Q8IYJ2 551 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 NOA1Q8NC60 698 aaKnown RBP10.47□□□□□ -0.73
NDE1-201ENST00000396354 NELFBQ8WX92 580 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 RIN2Q8WYP3 895 aaPredicted RBP10.47□□□□□ -0.73
NDE1-201ENST00000396354 SRPRBQ9Y5M8 271 aaKnown RBP10.47□□□□□ -0.73
NDE1-201ENST00000396354 ANKRD31Q8N7Z5 1873 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 NAV1Q8NEY1 1877 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 PHLPP2Q6ZVD8 1323 aa10.47□□□□□ -0.73
NDE1-201ENST00000396354 CCDC66A2RUB6 948 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 USP17L3A6NCW0 530 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 USP17L4A6NCW7 530 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 H3BQF6 201 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 STX10O60499 249 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 STAT6P42226 847 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 INF2Q27J81 1249 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 USP17L1Q7RTZ2 530 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 STAG2Q8N3U4 1231 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 TNFRSF25Q93038 417 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 TRIM47Q96LD4 638 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 ANKRD2Q9GZV1 360 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 CEP131Q9UPN4 1083 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 MRFAP1Q9Y605 127 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 PDS5AQ29RF7 1337 aaKnown RBP10.46□□□□□ -0.73
NDE1-201ENST00000396354 SEMA3EO15041 775 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 GYPCP04921 128 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 RNASE9P60153 205 aaKnown RBP10.46□□□□□ -0.73
NDE1-201ENST00000396354 TTC19Q6DKK2 380 aaPredicted RBP10.46□□□□□ -0.73
NDE1-201ENST00000396354 TYW1BQ6NUM6 668 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 TMTC3Q6ZXV5 915 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 AKT1S1Q96B36 256 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.46□□□□□ -0.73
NDE1-201ENST00000396354 POLLQ9UGP5 575 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 ADGRG1Q9Y653 693 aa10.46□□□□□ -0.73
NDE1-201ENST00000396354 SLURP2P0DP57 97 aa10.46□□□□□ -0.74
NDE1-201ENST00000396354 NAP1L1P55209 391 aaKnown RBP10.46□□□□□ -0.74
NDE1-201ENST00000396354 RAD51AP2Q09MP3 1159 aa10.46□□□□□ -0.74
NDE1-201ENST00000396354 ENOX1Q8TC92 643 aaKnown RBP10.46□□□□□ -0.74
NDE1-201ENST00000396354 PHF20Q9BVI0 1012 aa10.46□□□□□ -0.74
NDE1-201ENST00000396354 KANSL2Q9H9L4 492 aa10.46□□□□□ -0.74
NDE1-201ENST00000396354 ABCB6Q9NP58 842 aa10.46□□□□□ -0.74
NDE1-201ENST00000396354 SMARCAL1Q9NZC9 954 aa10.46□□□□□ -0.74
NDE1-201ENST00000396354 DUSP10Q9Y6W6 482 aa10.46□□□□□ -0.74
NDE1-201ENST00000396354 CTAGE9A4FU28 777 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 SSBP05455 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
NDE1-201ENST00000396354 CXCR5P32302 372 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 USP5P45974 858 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 CRY2Q49AN0 593 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 KIAA1328Q86T90 577 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 DZIP1Q86YF9 867 aaKnown RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 SMCR8Q8TEV9 937 aaPredicted RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 GJA10Q969M2 543 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 FOXP1Q9H334 677 aaPredicted RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 TRIM66O15016 1216 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 NKRFO15226 690 aaKnown RBP eCLIP10.45□□□□□ -0.74
NDE1-201ENST00000396354 ORC4O43929 436 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 TRIM21P19474 475 aaKnown RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 PMS1P54277 932 aaKnown RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 NR1I3Q14994 352 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 LETM2Q2VYF4 491 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 SPATA1Q5VX52 437 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 RTFDC1Q9BY42 306 aaPredicted RBP10.45□□□□□ -0.74
NDE1-201ENST00000396354 MKNK2Q9HBH9 465 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 JADE2Q9NQC1 790 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 FAN1Q9Y2M0 1017 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 FAM205AQ6ZU69 1335 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 SNED1Q8TER0 1413 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 B4DLN1 442 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 KCNJ18B7U540 433 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 ZNF185O15231 689 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 ZNF18P17022 549 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 CAPN2P17655 700 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 VSNL1P62760 191 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 ERVK-24P63145 666 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 MAP3K9P80192 1104 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 ARID5AQ03989 594 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 KCNJ12Q14500 433 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 MAPKAPK5Q8IW41 473 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 TGFBRAP1Q8WUH2 860 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 MXD3Q9BW11 206 aa10.45□□□□□ -0.74
NDE1-201ENST00000396354 RNF26Q9BY78 433 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms