RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 RBM25P49756 843 aaKnown RBP22.35■■□□□ 1.17
HOXA9-202ENST00000396345 NCAPG2Q86XI2 1143 aa22.35■■□□□ 1.17
HOXA9-202ENST00000396345 FANCBQ8NB91 859 aa22.35■■□□□ 1.17
HOXA9-202ENST00000396345 MROH8Q9H579 483 aa22.35■■□□□ 1.17
HOXA9-202ENST00000396345 VAT1LQ9HCJ6 419 aa22.35■■□□□ 1.17
HOXA9-202ENST00000396345 COPB2P35606 906 aa22.34■■□□□ 1.17
HOXA9-202ENST00000396345 GNAQP50148 359 aa22.34■■□□□ 1.17
HOXA9-202ENST00000396345 TOB2Q14106 344 aaPredicted RBP22.34■■□□□ 1.17
HOXA9-202ENST00000396345 GPR142Q7Z601 462 aa22.34■■□□□ 1.17
HOXA9-202ENST00000396345 PLEKHH3Q7Z736 793 aa22.34■■□□□ 1.17
HOXA9-202ENST00000396345 ZNF536O15090 1300 aa22.33■■□□□ 1.17
HOXA9-202ENST00000396345 RCAN1P53805 252 aa22.33■■□□□ 1.17
HOXA9-202ENST00000396345 AGBL1Q96MI9 1066 aa22.33■■□□□ 1.17
HOXA9-202ENST00000396345 LZTS2Q9BRK4 669 aa22.33■■□□□ 1.17
HOXA9-202ENST00000396345 ALDH8A1Q9H2A2 487 aaPredicted RBP22.33■■□□□ 1.17
HOXA9-202ENST00000396345 JMJD4Q9H9V9 463 aa22.33■■□□□ 1.17
HOXA9-202ENST00000396345 SRRDQ9UH36 339 aa22.33■■□□□ 1.17
HOXA9-202ENST00000396345 IVNS1ABPQ9Y6Y0 642 aa22.33■■□□□ 1.17
HOXA9-202ENST00000396345 DOCK3Q8IZD9 2030 aa22.33■■□□□ 1.16
HOXA9-202ENST00000396345 GOLGA8AA7E2F4 631 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 GOLGA8BA8MQT2 603 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 ICAM1P05362 532 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 NEK4P51957 841 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 CDC37Q16543 378 aaPredicted RBP22.32■■□□□ 1.16
HOXA9-202ENST00000396345 NBPF11Q86T75 865 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 RIOX1Q9H6W3 641 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 RBM28Q9NW13 759 aaKnown RBP22.32■■□□□ 1.16
HOXA9-202ENST00000396345 CCPG1Q9ULG6 757 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 RIPK3Q9Y572 518 aa22.32■■□□□ 1.16
HOXA9-202ENST00000396345 METAP2P50579 478 aaKnown RBP eCLIP22.31■■□□□ 1.16
HOXA9-202ENST00000396345 PRMT2P55345 433 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 EVCP57679 992 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 PRKCZQ05513 592 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 PKN2Q16513 984 aaKnown RBP22.31■■□□□ 1.16
HOXA9-202ENST00000396345 RTN1Q16799 776 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 SLC35G1Q2M3R5 365 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 KIF2CQ99661 725 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 PNMA2Q9UL42 364 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 GABRQQ9UN88 632 aa22.31■■□□□ 1.16
HOXA9-202ENST00000396345 STRNO43815 780 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 PLEKHA8P1O95397 391 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 ALAS1P13196 640 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 PTPREP23469 700 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 SMARCA1P28370 1054 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 ANKRD1Q15327 319 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 TKFCQ3LXA3 575 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 TMTC3Q6ZXV5 915 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 CHST13Q8NET6 341 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 TBC1D32Q96NH3 1257 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 LARP6Q9BRS8 491 aaKnown RBP22.3■■□□□ 1.16
HOXA9-202ENST00000396345 SPZ1Q9BXG8 430 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 GJD2Q9UKL4 321 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 HPS5Q9UPZ3 1129 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 PTPN22Q9Y2R2 807 aa22.3■■□□□ 1.16
HOXA9-202ENST00000396345 BAZ2BQ9UIF8 2168 aaKnown RBP22.3■■□□□ 1.16
HOXA9-202ENST00000396345 SLC15A5A6NIM6 579 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 CYTH3O43739 400 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 PDIA3P30101 505 aaKnown RBP22.29■■□□□ 1.16
HOXA9-202ENST00000396345 FLT3LGP49771 235 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 AK2P54819 239 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 PPP2R5BQ15173 497 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 QRICH1Q2TAL8 776 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 MORN1Q5T089 497 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 CMTR1Q8N1G2 835 aaKnown RBP22.29■■□□□ 1.16
HOXA9-202ENST00000396345 SRBD1Q8N5C6 995 aaKnown RBP22.29■■□□□ 1.16
HOXA9-202ENST00000396345 SOCS4Q8WXH5 440 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 MTMR8Q96EF0 704 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 ABHD8Q96I13 439 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 TRERF1Q96PN7 1200 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 PIGSQ96S52 555 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 NUDT12Q9BQG2 462 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 FBXO40Q9UH90 709 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 PLXNB2O15031 1838 aa22.29■■□□□ 1.16
HOXA9-202ENST00000396345 CCDC196A0A1B0GTZ2 297 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 ZBTB5O15062 677 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 FCER1AP12319 257 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 TAL1P17542 331 aaPredicted RBP22.28■■□□□ 1.16
HOXA9-202ENST00000396345 GRB14Q14449 540 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 FBXO46Q6PJ61 603 aaPredicted RBP22.28■■□□□ 1.16
HOXA9-202ENST00000396345 HOMER1Q86YM7 354 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 RAET1EQ8TD07 263 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 ZNF274Q96GC6 653 aaPredicted RBP22.28■■□□□ 1.16
HOXA9-202ENST00000396345 MMP19Q99542 508 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 MCOLN1Q9GZU1 580 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 RNF146Q9NTX7 359 aa22.28■■□□□ 1.16
HOXA9-202ENST00000396345 FAM217BQ9NTX9 383 aaPredicted RBP22.28■■□□□ 1.16
HOXA9-202ENST00000396345 MYH6P13533 1939 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 SMCHD1A6NHR9 2005 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 CDC27P30260 824 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 KCTD2Q14681 263 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 FBXO11Q86XK2 927 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 ABRAQ8N0Z2 381 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 CCDC82Q8N4S0 544 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 PIBF1Q8WXW3 757 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 RRP36Q96EU6 259 aaKnown RBP22.27■■□□□ 1.16
HOXA9-202ENST00000396345 ACAD9Q9H845 621 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 PTCH2Q9Y6C5 1203 aa22.27■■□□□ 1.16
HOXA9-202ENST00000396345 NID2Q14112 1375 aa22.26■■□□□ 1.15
HOXA9-202ENST00000396345 PNMA6FA0A0J9YX94 578 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms