RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PAK1Q13153 545 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ARHGEF6Q15052 776 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 TMTC3Q6ZXV5 915 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 CCAR2Q8N163 923 aaKnown RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 CGNQ9P2M7 1197 aaKnown RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 NDUFB9Q9Y6M9 179 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ANKRD62A6NC57 917 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 RIMBP2O15034 1052 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 GYS1P13807 737 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PRPF38AQ8NAV1 312 aaKnown RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 ZMYND12Q9H0C1 365 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 HOXC10Q9NYD6 342 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PCDHA7Q9UN72 937 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 GTPBP6O43824 516 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 SLC9C1Q4G0N8 1177 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 OTUD7BQ6GQQ9 843 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 FBXO11Q86XK2 927 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 SEC62Q99442 399 aaKnown RBP3.78□□□□□ -1.8
VPS13C-203ENST00000395896 EP400Q96L91 3159 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 FLOT1O75955 427 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PTPREP23469 700 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 PIK3AP1Q6ZUJ8 805 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 TBC1D16Q8TBP0 767 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 TMEM63CQ9P1W3 806 aa3.78□□□□□ -1.8
VPS13C-203ENST00000395896 TTLL12Q14166 644 aaPredicted RBP3.78□□□□□ -1.81
VPS13C-203ENST00000395896 PPP2R5AQ15172 486 aa3.78□□□□□ -1.81
VPS13C-203ENST00000395896 VGLL2Q8N8G2 317 aa3.78□□□□□ -1.81
VPS13C-203ENST00000395896 TSKSQ9UJT2 592 aa3.78□□□□□ -1.81
VPS13C-203ENST00000395896 PPP2R3BQ9Y5P8 575 aa3.78□□□□□ -1.81
VPS13C-203ENST00000395896 BCL9LQ86UU0 1499 aa3.78□□□□□ -1.81
VPS13C-203ENST00000395896 DOT1LQ8TEK3 1739 aa3.78□□□□□ -1.81
VPS13C-203ENST00000395896 CTAGE9A4FU28 777 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SNW1Q13573 536 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TOB2Q14106 344 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 KCNV1Q6PIU1 500 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SARM1Q6SZW1 724 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 MIS12Q9H081 205 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.77□□□□□ -1.814e-6■□□□□ 10.2
VPS13C-203ENST00000395896 TBC1D22BQ9NU19 505 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 MYO7AQ13402 2215 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 NDC80O14777 642 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 GAS7O60861 476 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SLC15A2Q16348 729 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TCERG1LQ5VWI1 586 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 MOXD1Q6UVY6 613 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CSGALNACT2Q8N6G5 542 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 LARP4BQ92615 738 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 DHX58Q96C10 678 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 IFT74Q96LB3 600 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 ZKSCAN3Q9BRR0 538 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 MTFR1LQ9H019 292 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 DNAJC25Q9H1X3 360 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SYNRGQ9UMZ2 1314 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 RRP9O43818 475 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 N4BP1O75113 896 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 EPB41P11171 864 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CDK8P49336 464 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SLFN13Q68D06 897 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SAMD1Q6SPF0 538 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 C16orf86Q6ZW13 317 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 IGDCC4Q8TDY8 1250 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TAF4BQ92750 862 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 NACC1Q96RE7 527 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CCSER1Q9C0I3 900 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 DISP2A7MBM2 1401 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CALUO43852 315 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 AOC3Q16853 763 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CIAPIN1Q6FI81 312 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CEP128Q6ZU80 1094 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 DAAM1Q9Y4D1 1078 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TMEM132AQ24JP5 1023 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CEP112Q8N8E3 955 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 SNX29Q8TEQ0 813 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 PSMD1Q99460 953 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 GCOM1H8Y6P7 765 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 POLR2MP0CAP2 368 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CPA1P15085 419 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 NEK11Q8NG66 645 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 ANKS1AQ92625 1134 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 MORC2Q9Y6X9 1032 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 COL22A1Q8NFW1 1626 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 NUP188Q5SRE5 1749 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 CDC25BP30305 580 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 NLRP12P59046 1061 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 C10orf76Q5T2E6 689 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 KIFAP3Q92845 792 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TIPINQ9BVW5 301 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TSPYL1Q9H0U9 437 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 C19orf81C9J6K1 198 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 AKR1B15C9JRZ8 316 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 TBC1D8BQ0IIM8 1120 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 KIF4BQ2VIQ3 1234 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 ENOX1Q8TC92 643 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 DCPSQ96C86 337 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 BAG1Q99933 345 aaPredicted RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 LARP6Q9BRS8 491 aaKnown RBP3.77□□□□□ -1.81
VPS13C-203ENST00000395896 MYH4Q9Y623 1939 aa3.77□□□□□ -1.81
VPS13C-203ENST00000395896 M0R2C6 588 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms