RNA–Protein interactions for RNA: ENST00000395837.1

UBB-202, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBB, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-202ENST00000395837 FBXO40Q9UH90 709 aa11.66□□□□□ -0.54
UBB-202ENST00000395837 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
UBB-202ENST00000395837 A0A0U1RQG5 324 aaPredicted RBP11.65□□□□□ -0.54
UBB-202ENST00000395837 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.65□□□□□ -0.54
UBB-202ENST00000395837 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.65□□□□□ -0.54
UBB-202ENST00000395837 TIMP1P01033 207 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 ZFYP08048 801 aaPredicted RBP11.65□□□□□ -0.54
UBB-202ENST00000395837 SNAP25P60880 206 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 BEX3Q00994 111 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 TFAP4Q01664 338 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 CNTN2Q02246 1040 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 PDE4BQ07343 736 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 GRIN2CQ14957 1233 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 LRRFIP1Q32MZ4 808 aaKnown RBP11.65□□□□□ -0.54
UBB-202ENST00000395837 GIMAP6Q6P9H5 292 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 EEPD1Q7L9B9 569 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 ANKRD33Q7Z3H0 272 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 CCDC144CPQ8IYA2 1237 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 IFNL3Q8IZI9 196 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 TMEM199Q8N511 208 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 KLHDC9Q8NEP7 349 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.65□□□□□ -0.54
UBB-202ENST00000395837 ABHD16BQ9H3Z7 469 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 ACAD9Q9H845 621 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 SLC38A10Q9HBR0 1119 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 MTMR4Q9NYA4 1195 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 STX8Q9UNK0 236 aa11.65□□□□□ -0.54
UBB-202ENST00000395837 SMCHD1A6NHR9 2005 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 DNAJC25-GNG10A0A024R161 153 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
UBB-202ENST00000395837 ADCY6O43306 1168 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 ALAS1P13196 640 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 CSF2RAP15509 400 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 SLC1A4P43007 532 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 STAT2P52630 851 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 PPIGQ13427 754 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBB-202ENST00000395837 MAMDC4Q6UXC1 1216 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
UBB-202ENST00000395837 CHST13Q8NET6 341 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 AGBL1Q96MI9 1066 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 TOX2Q96NM4 488 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
UBB-202ENST00000395837 GAS2L1Q99501 681 aaPredicted RBP11.64□□□□□ -0.55
UBB-202ENST00000395837 ZNF576Q9H609 170 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 RNF146Q9NTX7 359 aa11.64□□□□□ -0.55
UBB-202ENST00000395837 IGKV6D-41A0A0C4DH26 115 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.63□□□□□ -0.55
UBB-202ENST00000395837 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 GRXCR1A8MXD5 290 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 ARVCFO00192 962 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 MCCP23508 829 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 CYP2C18P33260 490 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 PBX2P40425 430 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 GJA9P57773 515 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 TNFAIP2Q03169 654 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 CCDC96Q2M329 555 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 MFSD5Q6N075 450 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 CXCL17Q6UXB2 119 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 GMCL1P1Q8NEA9 526 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 CHURC1Q8WUH1 139 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 AP5M1Q9H0R1 490 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 TOMM22Q9NS69 142 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 ZBTB47Q9UFB7 747 aaPredicted RBP11.63□□□□□ -0.55
UBB-202ENST00000395837 TBX21Q9UL17 535 aa11.63□□□□□ -0.55
UBB-202ENST00000395837 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
UBB-202ENST00000395837 CDH23Q9H251 3354 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 ELP1O95163 1332 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 MYH4Q9Y623 1939 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 TMEM265A0A087WTH1 108 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 ATP2A1O14983 1001 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 ERC2O15083 957 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 DYNC1LI2O43237 492 aaPredicted RBP11.62□□□□□ -0.55
UBB-202ENST00000395837 IGFBP4P22692 258 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 PTGS1P23219 599 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 OAZ1P54368 228 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 CCL23P55773 120 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 PPARAQ07869 468 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 CCDC85BQ15834 202 aaPredicted RBP11.62□□□□□ -0.55
UBB-202ENST00000395837 CCSAPQ6IQ19 270 aaPredicted RBP11.62□□□□□ -0.55
UBB-202ENST00000395837 PSRC1Q6PGN9 363 aaPredicted RBP11.62□□□□□ -0.55
UBB-202ENST00000395837 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 ZNF365Q70YC5 407 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 TLK2Q86UE8 772 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 FAM160B2Q86V87 743 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 FBXO16Q8IX29 292 aaPredicted RBP11.62□□□□□ -0.55
UBB-202ENST00000395837 USP38Q8NB14 1042 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 NEDD1Q8NHV4 660 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 SYMPKQ92797 1274 aaKnown RBP11.62□□□□□ -0.55
UBB-202ENST00000395837 TRERF1Q96PN7 1200 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 PRDM12Q9H4Q4 367 aa11.62□□□□□ -0.55
UBB-202ENST00000395837 A1CFQ9NQ94 594 aaKnown RBP11.62□□□□□ -0.55
UBB-202ENST00000395837 GREB1LQ9C091 1923 aaPredicted RBP11.61□□□□□ -0.55
UBB-202ENST00000395837 ASB14A6NK59 587 aa11.61□□□□□ -0.55
UBB-202ENST00000395837 ZBBXA8MT70 800 aa11.61□□□□□ -0.55
UBB-202ENST00000395837 ZEB2O60315 1214 aa11.61□□□□□ -0.55
UBB-202ENST00000395837 RANBP6O60518 1105 aaKnown RBP11.61□□□□□ -0.55
UBB-202ENST00000395837 CST5P28325 142 aaPredicted RBP11.61□□□□□ -0.55
UBB-202ENST00000395837 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
UBB-202ENST00000395837 FSCN1Q16658 493 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms